RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 CHD9Q3L8U1 2897 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 F5H6K3 240 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 CABYRO75952 493 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 KLRC3Q07444 240 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
PBX3-212ENST00000538998 C1QTNF1Q9BXJ1 281 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 SEZ6LQ9BYH1 1024 aa16.92■□□□□ 0.3
PBX3-212ENST00000538998 YBX2Q9Y2T7 364 aaKnown RBP16.92■□□□□ 0.3
PBX3-212ENST00000538998 CCER2I3L3R5 266 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 CTAGE5O15320 804 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 NDUFB10O96000 172 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 OAZ1P54368 228 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 AAK1Q2M2I8 961 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 FGD4Q96M96 766 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 SLC38A10Q9HBR0 1119 aa16.91■□□□□ 0.3
PBX3-212ENST00000538998 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
PBX3-212ENST00000538998 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
PBX3-212ENST00000538998 OTOP2Q7RTS6 562 aa16.9■□□□□ 0.3
PBX3-212ENST00000538998 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
PBX3-212ENST00000538998 KATNBL1Q9H079 304 aa16.9■□□□□ 0.3
PBX3-212ENST00000538998 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
PBX3-212ENST00000538998 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
PBX3-212ENST00000538998 ATP5JP18859 108 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 RASA1P20936 1047 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 BEX3Q00994 111 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 TNFAIP2Q03169 654 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
PBX3-212ENST00000538998 HAUS7Q99871 368 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 MKNK2Q9HBH9 465 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 FEM1BQ9UK73 627 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 SLC4A7Q9Y6M7 1214 aa16.89■□□□□ 0.29
PBX3-212ENST00000538998 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
PBX3-212ENST00000538998 ZEB2O60315 1214 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 HMMRO75330 724 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 BMP1P13497 986 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 ITGA7Q13683 1181 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 CXCL17Q6UXB2 119 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 TLK2Q86UE8 772 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
PBX3-212ENST00000538998 MICALL1Q8N3F8 863 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 NOC4LQ9BVI4 516 aaKnown RBP16.88■□□□□ 0.29
PBX3-212ENST00000538998 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 UMODL1Q5DID0 1318 aa16.88■□□□□ 0.29
PBX3-212ENST00000538998 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.87■□□□□ 0.29
PBX3-212ENST00000538998 ASB14A6NK59 587 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 FDX1P10109 184 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 RABGGTBP53611 331 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 CCL23P55773 120 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 CNTN2Q02246 1040 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
PBX3-212ENST00000538998 PUS7LQ9H0K6 701 aaKnown RBP16.87■□□□□ 0.29
PBX3-212ENST00000538998 AP5M1Q9H0R1 490 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 ACAD9Q9H845 621 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 GNEQ9Y223 722 aaKnown RBP16.87■□□□□ 0.29
PBX3-212ENST00000538998 ASTN1O14525 1302 aa16.87■□□□□ 0.29
PBX3-212ENST00000538998 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 ERC2O15083 957 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 CHGBP05060 677 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 ATP2A2P16615 1042 aaKnown RBP16.86■□□□□ 0.29
PBX3-212ENST00000538998 TFF2Q03403 129 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
PBX3-212ENST00000538998 FAM133AQ8N9E0 248 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 GMCL1P1Q8NEA9 526 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 MKL1Q969V6 931 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 NECAB3Q96P71 396 aaPredicted RBP16.86■□□□□ 0.29
PBX3-212ENST00000538998 WNT8AQ9H1J5 351 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 HOMER2Q9NSB8 354 aa16.86■□□□□ 0.29
PBX3-212ENST00000538998 ARIH1Q9Y4X5 557 aaPredicted RBP16.86■□□□□ 0.29
PBX3-212ENST00000538998 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 B4GALT4O60513 344 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 PFKMP08237 780 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
PBX3-212ENST00000538998 SKIV2LQ15477 1246 aaKnown RBP16.85■□□□□ 0.29
PBX3-212ENST00000538998 TRPV6Q9H1D0 765 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 COG6Q9Y2V7 657 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 GRIN2DO15399 1336 aa16.85■□□□□ 0.29
PBX3-212ENST00000538998 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
PBX3-212ENST00000538998 TTLL1O95922 423 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 MYOGP15173 224 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
PBX3-212ENST00000538998 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 PANK1Q8TE04 598 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 STRBPQ96SI9 672 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms