RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C9orf50Q5SZB4 431 aa14.85□□□□□ -0.03
VAMP1-206ENST00000538970 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
VAMP1-206ENST00000538970 CRBNQ96SW2 442 aa14.85□□□□□ -0.03
VAMP1-206ENST00000538970 TSEN34Q9BSV6 310 aaKnown RBP14.85□□□□□ -0.03
VAMP1-206ENST00000538970 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
VAMP1-206ENST00000538970 TSPY2A6NKD2 308 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ADCY6O43306 1168 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 SLC1A4P43007 532 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ACLYP53396 1101 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 CTDSPL2Q05D32 466 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ACVR2BQ13705 512 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 SHHQ15465 462 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 VPS53Q5VIR6 699 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 CCSAPQ6IQ19 270 aaPredicted RBP14.84□□□□□ -0.03
VAMP1-206ENST00000538970 FAM160B2Q86V87 743 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 USP38Q8NB14 1042 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 KLHDC9Q8NEP7 349 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 STAG1Q8WVM7 1258 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 EVI5LQ96CN4 794 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 IL17RBQ9NRM6 502 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 HOMER2Q9NSB8 354 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ANAPC4Q9UJX5 808 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ISY1Q9ULR0 285 aaKnown RBP14.84□□□□□ -0.03
VAMP1-206ENST00000538970 STX8Q9UNK0 236 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 ZNF536O15090 1300 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 TTC28Q96AY4 2481 aa14.84□□□□□ -0.03
VAMP1-206ENST00000538970 MYADML2A6NDP7 307 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 MOXD2PA6NHM9 499 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 TNFRSF10AO00220 468 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 NMT2O60551 498 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
VAMP1-206ENST00000538970 DUSP11O75319 330 aaKnown RBP14.83□□□□□ -0.04
VAMP1-206ENST00000538970 FOSL2P15408 326 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 MCCP23508 829 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 ITGB8P26012 769 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 CST5P28325 142 aaPredicted RBP14.83□□□□□ -0.04
VAMP1-206ENST00000538970 PLA2G5P39877 138 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.04
VAMP1-206ENST00000538970 ARMCX2Q7L311 632 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 RASGRP2Q7LDG7 609 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 KATNBL1Q9H079 304 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 ABHD16BQ9H3Z7 469 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 INCENPQ9NQS7 918 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 STARD7Q9NQZ5 370 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 RNF146Q9NTX7 359 aa14.83□□□□□ -0.04
VAMP1-206ENST00000538970 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
VAMP1-206ENST00000538970 SMCHD1A6NHR9 2005 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 ORC4O43929 436 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 PLA2G6O60733 806 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 NOVP48745 357 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 PDE1AP54750 535 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 IKQ13123 557 aaPredicted RBP14.82□□□□□ -0.04
VAMP1-206ENST00000538970 KCNA10Q16322 511 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 CCDC144BQ3MJ40 725 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 ANKRD33Q7Z3H0 272 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 CCDC144CPQ8IYA2 1237 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 FAM133AQ8N9E0 248 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 NUP133Q8WUM0 1156 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 UPF3AQ9H1J1 476 aaKnown RBP14.82□□□□□ -0.04
VAMP1-206ENST00000538970 A1CFQ9NQ94 594 aaKnown RBP14.82□□□□□ -0.04
VAMP1-206ENST00000538970 HELLSQ9NRZ9 838 aa14.82□□□□□ -0.04
VAMP1-206ENST00000538970 LRRC37A2A6NM11 1700 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 FGRP09769 529 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 GJA9P57773 515 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 IRX5P78411 483 aaPredicted RBP14.81□□□□□ -0.04
VAMP1-206ENST00000538970 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 ALX1Q15699 326 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 RCSD1Q6JBY9 416 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 PRR12Q9ULL5 1215 aa14.81□□□□□ -0.04
VAMP1-206ENST00000538970 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 RANBP6O60518 1105 aaKnown RBP14.8□□□□□ -0.04
VAMP1-206ENST00000538970 C6orf222P0C671 652 aaPredicted RBP14.8□□□□□ -0.04
VAMP1-206ENST00000538970 RAG1P15918 1043 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 EPHB4P54760 987 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 TJAP1Q5JTD0 557 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 PCSK9Q8NBP7 692 aaKnown RBP14.8□□□□□ -0.04
VAMP1-206ENST00000538970 GLT1D1Q96MS3 346 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 ASTN1O14525 1302 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 ELP1O95163 1332 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 ZMYM6O95789 1325 aa14.8□□□□□ -0.04
VAMP1-206ENST00000538970 TMEM265A0A087WTH1 108 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 DCDC2CA8MYV0 355 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms