RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.71■□□□□ 0.91
DDX11-212ENST00000538740 OXER1Q8TDS5 423 aa20.71■□□□□ 0.91
DDX11-212ENST00000538740 CUL5Q93034 780 aa20.71■□□□□ 0.91
DDX11-212ENST00000538740 CDCA5Q96FF9 252 aa20.71■□□□□ 0.91
DDX11-212ENST00000538740 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
DDX11-212ENST00000538740 FDX1P10109 184 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 SLC39A14Q15043 492 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 REXO1Q8N1G1 1221 aaKnown RBP20.7■□□□□ 0.9
DDX11-212ENST00000538740 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 TNFRSF25Q93038 417 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 PRR12Q9ULL5 1215 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 CLEC11AQ9Y240 323 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 CLIC4Q9Y696 253 aa20.7■□□□□ 0.9
DDX11-212ENST00000538740 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
DDX11-212ENST00000538740 USP2O75604 605 aaPredicted RBP20.69■□□□□ 0.9
DDX11-212ENST00000538740 VEGFAP15692 232 aaPredicted RBP20.69■□□□□ 0.9
DDX11-212ENST00000538740 NPY5RQ15761 445 aa20.69■□□□□ 0.9
DDX11-212ENST00000538740 ARMC9Q7Z3E5 817 aa20.69■□□□□ 0.9
DDX11-212ENST00000538740 GPT2Q8TD30 523 aa20.69■□□□□ 0.9
DDX11-212ENST00000538740 SHISA4Q96DD7 197 aa20.69■□□□□ 0.9
DDX11-212ENST00000538740 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
DDX11-212ENST00000538740 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
DDX11-212ENST00000538740 BACE1P56817 501 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 SPP2Q13103 211 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 MTMR2Q13614 643 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 TTLL12Q14166 644 aaPredicted RBP20.68■□□□□ 0.9
DDX11-212ENST00000538740 NONOQ15233 471 aaKnown RBP eCLIP20.68■□□□□ 0.9
DDX11-212ENST00000538740 TTC38Q5R3I4 469 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 TYW1BQ6NUM6 668 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 ANKRD13AQ8IZ07 590 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 ZKSCAN4Q969J2 545 aaPredicted RBP20.68■□□□□ 0.9
DDX11-212ENST00000538740 C12orf42Q96LP6 360 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 RIC8AQ9NPQ8 531 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 CTDP1Q9Y5B0 961 aaPredicted RBP20.68■□□□□ 0.9
DDX11-212ENST00000538740 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
DDX11-212ENST00000538740 PARP14Q460N5 1801 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 PTPRFP10586 1907 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 A0A1W2PQ27 194 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 A0A1W2PQ64 194 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 A0A1W2PQD8 194 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 ORC2Q13416 577 aaPredicted RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 ADALQ6DHV7 355 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 CAVIN1Q6NZI2 390 aaKnown RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 PRPF38AQ8NAV1 312 aaKnown RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 COA7Q96BR5 231 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 SLF1Q9BQI6 1058 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 GLIS2Q9BZE0 524 aaPredicted RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
DDX11-212ENST00000538740 PCDHA6Q9UN73 950 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 PCDHA8Q9Y5H6 950 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 ZHX2Q9Y6X8 837 aa20.67■□□□□ 0.9
DDX11-212ENST00000538740 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 M0R2N6 131 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 CUTAO60888 179 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 PRKG1Q13976 671 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 CCDC84Q86UT8 332 aaPredicted RBP20.66■□□□□ 0.9
DDX11-212ENST00000538740 KIFC2Q96AC6 838 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 NAP1L4Q99733 375 aaKnown RBP20.66■□□□□ 0.9
DDX11-212ENST00000538740 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
DDX11-212ENST00000538740 TANGO6Q9C0B7 1094 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 RANBP17Q9H2T7 1088 aaKnown RBP20.66■□□□□ 0.9
DDX11-212ENST00000538740 PSTPIP2Q9H939 334 aa20.66■□□□□ 0.9
DDX11-212ENST00000538740 DDX19AQ9NUU7 478 aaKnown RBP20.66■□□□□ 0.9
DDX11-212ENST00000538740 RBBP6Q7Z6E9 1792 aaKnown RBP20.66■□□□□ 0.9
DDX11-212ENST00000538740 VGLL4Q14135 290 aa20.65■□□□□ 0.9
DDX11-212ENST00000538740 PTPAQ15257 358 aa20.65■□□□□ 0.9
DDX11-212ENST00000538740 MAP3K11Q16584 847 aa20.65■□□□□ 0.9
DDX11-212ENST00000538740 CCDC183Q5T5S1 534 aa20.65■□□□□ 0.9
DDX11-212ENST00000538740 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
DDX11-212ENST00000538740 MRPS27Q92552 414 aaKnown RBP20.65■□□□□ 0.9
DDX11-212ENST00000538740 ABCB11O95342 1321 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 POTECB2RU33 542 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 VCAM1P19320 739 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 ATP2B1P20020 1258 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 TOB1P50616 345 aaPredicted RBP20.64■□□□□ 0.89
DDX11-212ENST00000538740 AP3B2Q13367 1082 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 KIAA1755Q5JYT7 1200 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 PGBD1Q96JS3 809 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 PCDHA7Q9UN72 937 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 MRPL11Q9Y3B7 192 aaKnown RBP20.64■□□□□ 0.89
DDX11-212ENST00000538740 SNCAIPQ9Y6H5 919 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.89
DDX11-212ENST00000538740 LAD1O00515 517 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
DDX11-212ENST00000538740 PPATQ06203 517 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.63■□□□□ 0.89
DDX11-212ENST00000538740 NEK8Q86SG6 692 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 ERO1BQ86YB8 467 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 CCAR1Q8IX12 1150 aaKnown RBP20.63■□□□□ 0.89
DDX11-212ENST00000538740 FERMT2Q96AC1 680 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
DDX11-212ENST00000538740 RPAP3Q9H6T3 665 aaPredicted RBP20.63■□□□□ 0.89
DDX11-212ENST00000538740 PCDHB6Q9Y5E3 794 aa20.63■□□□□ 0.89
DDX11-212ENST00000538740 MYPNQ86TC9 1320 aa20.62■□□□□ 0.89
DDX11-212ENST00000538740 ZBED4O75132 1171 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms