RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 FBXO21O94952 628 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 ITGA4P13612 1032 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 ZSCAN20P17040 1043 aaPredicted RBP11.41□□□□□ -0.58
CD9-207ENST00000538418 SCNN1BP51168 640 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 MAP4K2Q12851 820 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 SLBPQ14493 270 aaKnown RBP eCLIP11.41□□□□□ -0.58
CD9-207ENST00000538418 NTRK3Q16288 839 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 MAMDC2Q7Z304 686 aaPredicted RBP11.41□□□□□ -0.58
CD9-207ENST00000538418 KCT2Q8NC54 265 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 ADCY4Q8NFM4 1077 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 KIFC2Q96AC6 838 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 EVI5LQ96CN4 794 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.41□□□□□ -0.58
CD9-207ENST00000538418 GP6Q9HCN6 339 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 CST3P01034 146 aaPredicted RBP11.4□□□□□ -0.58
CD9-207ENST00000538418 CAP2P40123 477 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 GFRA1P56159 465 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 SF1Q15637 639 aaKnown RBP11.4□□□□□ -0.58
CD9-207ENST00000538418 NBPF12Q5TAG4 269 aaPredicted RBP11.4□□□□□ -0.58
CD9-207ENST00000538418 PIK3R6Q5UE93 754 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 PRAMEF13Q5VWM6 474 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 ANKLE2Q86XL3 938 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 GALNT11Q8NCW6 608 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 JPH3Q8WXH2 748 aaPredicted RBP11.4□□□□□ -0.58
CD9-207ENST00000538418 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 RHOBTB2Q9BYZ6 727 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 DISC1Q9NRI5 854 aa11.4□□□□□ -0.58
CD9-207ENST00000538418 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 DDX3YO15523 660 aaKnown RBP11.39□□□□□ -0.59
CD9-207ENST00000538418 ADAM11O75078 769 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 PPFIA3O75145 1194 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 KCNH1O95259 989 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 MAP2K3P46734 347 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 MMRN1Q13201 1228 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
CD9-207ENST00000538418 SETDB1Q15047 1291 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 LONRF3Q496Y0 759 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 EXOSC6Q5RKV6 272 aaKnown RBP11.39□□□□□ -0.59
CD9-207ENST00000538418 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 GTF2IRD2BQ6EKJ0 949 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 ZCCHC8Q6NZY4 707 aaKnown RBP11.39□□□□□ -0.59
CD9-207ENST00000538418 GTF2IRD2Q86UP8 949 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 WNK4Q96J92 1243 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 ORAI3Q9BRQ5 295 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 CGGBP1Q9UFW8 167 aaPredicted RBP11.39□□□□□ -0.59
CD9-207ENST00000538418 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
CD9-207ENST00000538418 A0A087WZG4 1122 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 LILRB5O75023 590 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 ALBP02768 609 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 HOXC12P31275 282 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 SVIPQ8NHG7 77 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
CD9-207ENST00000538418 BRF1Q92994 677 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
CD9-207ENST00000538418 RGS20O76081 388 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 CRTAMO95727 393 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 KCNJ6P48051 423 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 GRB10Q13322 594 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 MAP4K3Q8IVH8 894 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 ATXN3LQ9H3M9 355 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 LUC7LQ9NQ29 371 aaKnown RBP11.37□□□□□ -0.59
CD9-207ENST00000538418 NSFL1CQ9UNZ2 370 aaKnown RBP11.37□□□□□ -0.59
CD9-207ENST00000538418 TRAF6Q9Y4K3 522 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 WDR7Q9Y4E6 1490 aa11.37□□□□□ -0.59
CD9-207ENST00000538418 M0R2C6 588 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 APPP05067 770 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 SNRPB2P08579 225 aaKnown RBP11.36□□□□□ -0.59
CD9-207ENST00000538418 SART3Q15020 963 aaKnown RBP11.36□□□□□ -0.59
CD9-207ENST00000538418 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
CD9-207ENST00000538418 CXorf57Q6NSI4 855 aaKnown RBP11.36□□□□□ -0.59
CD9-207ENST00000538418 UBE3DQ7Z6J8 389 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 KIF18BQ86Y91 864 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 TMEM145Q8NBT3 493 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
CD9-207ENST00000538418 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 PRKD3O94806 890 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 CD68P34810 354 aaPredicted RBP11.35□□□□□ -0.59
CD9-207ENST00000538418 RNF4P78317 190 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 DHX8Q14562 1220 aaKnown RBP11.35□□□□□ -0.59
CD9-207ENST00000538418 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 PTPN21Q16825 1174 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 VWCEQ96DN2 955 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 ENAMQ9NRM1 1142 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 TSPOAP1O95153 1857 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 KIAA0556O60303 1618 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
CD9-207ENST00000538418 COL17A1Q9UMD9 1497 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms