RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 HSP90AA2PQ14568 343 aaPredicted RBP7.49□□□□□ -1.21
USP28-206ENST00000538224 STRIP1Q5VSL9 837 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 CDKAL1Q5VV42 579 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 RRAGBQ5VZM2 374 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 ARMCX5Q6P1M9 558 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 USP49Q70CQ1 688 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 COL23A1Q86Y22 540 aaPredicted RBP7.49□□□□□ -1.21
USP28-206ENST00000538224 TEX2Q8IWB9 1127 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 GRAMD1CQ8IYS0 662 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 KIF18AQ8NI77 898 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 NOC3LQ8WTT2 800 aaKnown RBP7.49□□□□□ -1.21
USP28-206ENST00000538224 CNKSR1Q969H4 720 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 ZDHHC15Q96MV8 337 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 NAA15Q9BXJ9 866 aaKnown RBP7.49□□□□□ -1.21
USP28-206ENST00000538224 TRIM34Q9BYJ4 488 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 LRRC27Q9C0I9 530 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 PDCL3Q9H2J4 239 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 USP40Q9NVE5 1235 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 SCN9AQ15858 1988 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 MYH7BA7E2Y1 1941 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 LOXHD1Q8IVV2 1947 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PSMA7O14818 248 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 CTIFO43310 598 aaKnown RBP7.48□□□□□ -1.21
USP28-206ENST00000538224 RPN1P04843 607 aaKnown RBP7.48□□□□□ -1.21
USP28-206ENST00000538224 GCFC2P16383 781 aaKnown RBP7.48□□□□□ -1.21
USP28-206ENST00000538224 CRKP46108 304 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 FMR1Q06787 632 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP28-206ENST00000538224 ZNF543Q08ER8 600 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 TRAF1Q13077 416 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 TBX2Q13207 712 aaPredicted RBP7.48□□□□□ -1.21
USP28-206ENST00000538224 PICALMQ13492 652 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 INF2Q27J81 1249 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 USP17L2Q6R6M4 530 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 CABP7Q86V35 215 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PPFIBP1Q86W92 1011 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 HOMER1Q86YM7 354 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 CNGA4Q8IV77 575 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PROM2Q8N271 834 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 DCAF4Q8WV16 495 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 CALML4Q96GE6 196 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PPP1R13BQ96KQ4 1090 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PANX2Q96RD6 677 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 TMX1Q9H3N1 280 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 STK17AQ9UEE5 414 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 SERPINA10Q9UK55 444 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 SYNPO2Q9UMS6 1093 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP28-206ENST00000538224 PHLPP2Q6ZVD8 1323 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 KIF13BQ9NQT8 1826 aa7.48□□□□□ -1.21
USP28-206ENST00000538224 PNMA6FA0A0J9YX94 578 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 BICDL2A1A5D9 508 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 AKR1B15C9JRZ8 316 aaPredicted RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 H7C1D1 291 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 WNT7AO00755 349 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 CCNT1O60563 726 aaKnown RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 RHOBTB3O94955 611 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 GOLGA8HP0CJ92 632 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 AKR1B1P15121 316 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 SHMT1P34896 483 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 FXR2P51116 673 aaKnown RBP eCLIP7.47□□□□□ -1.21
USP28-206ENST00000538224 MRPL12P52815 198 aaKnown RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 NR1I3Q14994 352 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 LETM2Q2VYF4 491 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 COBLL1Q53SF7 1204 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 NOM1Q5C9Z4 860 aaKnown RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 CDC42EP5Q6NZY7 148 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 FAM114A1Q8IWE2 563 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 TRMT44Q8IYL2 757 aaKnown RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 CERS5Q8N5B7 392 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 RASGRP4Q8TDF6 673 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 DPF2Q92785 391 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 CUL5Q93034 780 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 ZNF622Q969S3 477 aaKnown RBP eCLIP7.47□□□□□ -1.21
USP28-206ENST00000538224 PIGSQ96S52 555 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 BAG1Q99933 345 aaPredicted RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 IDI2Q9BXS1 227 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 RIC8AQ9NPQ8 531 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 KBTBD4Q9NVX7 518 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 NYAP2Q9P242 653 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 PI4KBQ9UBF8 816 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 LIMA1Q9UHB6 759 aaKnown RBP7.47□□□□□ -1.21
USP28-206ENST00000538224 CTNND2Q9UQB3 1225 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 KDM3AQ9Y4C1 1321 aa7.47□□□□□ -1.21
USP28-206ENST00000538224 ATRNL1Q5VV63 1379 aa7.46□□□□□ -1.21
USP28-206ENST00000538224 RBBP6Q7Z6E9 1792 aaKnown RBP7.46□□□□□ -1.21
USP28-206ENST00000538224 EP400Q96L91 3159 aa7.46□□□□□ -1.22
USP28-206ENST00000538224 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
USP28-206ENST00000538224 MPHOSPH10O00566 681 aaKnown RBP7.46□□□□□ -1.22
USP28-206ENST00000538224 ZBTB5O15062 677 aa7.46□□□□□ -1.22
USP28-206ENST00000538224 ECE2O60344 883 aa7.46□□□□□ -1.22
USP28-206ENST00000538224 ENTPD3O75355 529 aa7.46□□□□□ -1.22
USP28-206ENST00000538224 EEF1GP26641 437 aaKnown RBP7.46□□□□□ -1.22
USP28-206ENST00000538224 KARSQ15046 597 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms