RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PSMD1Q99460 953 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TINF2Q9BSI4 451 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 YIPF2Q9BWQ6 316 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MIR1-1HGQ9H1L0 117 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 COPRSQ9NQ92 184 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FAM105AQ9NUU6 356 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KBTBD4Q9NVX7 518 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 STOML1Q9UBI4 398 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RGPD1P0DJD0 1748 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SHANK3Q9BYB0 1731 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ANKRD26Q9UPS8 1709 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SBF2Q86WG5 1849 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 KIF20BQ96Q89 1820 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 HMX2A2RU54 273 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ERVV-2B6SEH9 535 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TMPRSS2O15393 492 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RNMTO43148 476 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 DYRK3O43781 588 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 EIF4EBP3O60516 100 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ZBTB7AO95365 584 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 NFICP08651 508 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SLFN14P0C7P3 912 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TFE3P19532 575 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 BMP6P22004 513 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 MAP4P27816 1152 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ETF1P62495 437 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PTPN11Q06124 597 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CDK5R2Q13319 367 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TTLL4Q14679 1199 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RALBP1Q15311 655 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SLC15A2Q16348 729 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ZNF394Q53GI3 561 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PLEKHO1Q53GL0 409 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CDPF1Q6NVV7 123 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 INTS5Q6P9B9 1019 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 BNC2Q6ZN30 1099 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 MCM10Q7L590 875 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 COL23A1Q86Y22 540 aaPredicted RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RELL1Q8IUW5 271 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TRIM42Q8IWZ5 723 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CCDC146Q8IYE0 955 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ARMC10Q8N2F6 343 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TMEM130Q8N3G9 435 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SLC43A3Q8NBI5 491 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PNISRQ8TF01 805 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 XAGE3Q8WTP9 111 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 GAL3ST3Q96A11 431 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PLPPR2Q96GM1 343 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 MFSD14AQ96MC6 490 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TANGO6Q9C0B7 1094 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 C7orf69Q9H7B7 122 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CCSER2Q9H7U1 834 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 METTL14Q9HCE5 456 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PPP1R9AQ9ULJ8 1098 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RRP7AQ9Y3A4 280 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PCDH11XQ9BZA7 1347 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PCDH11YQ9BZA8 1340 aa3.33□□□□□ -1.88
TNFRSF1A-210ENST00000537842 FAM95CA0A1B0GW59 222 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SCO2A0A1W2PP80 73 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 K7ELQ4 463 aaPredicted RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 GRIN3BO60391 1043 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TIAF1O95411 115 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 IGHA1P01876 353 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ST13P50502 369 aaKnown RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 IGBP1P78318 339 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ZNF252P-AS1Q0IIN9 211 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RSPO4Q2I0M5 234 aaPredicted RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 KRT24Q2M2I5 525 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 UVSSAQ2YD98 709 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 AMOTQ4VCS5 1084 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 DIEXFQ68CQ4 756 aaKnown RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 LRFN4Q6PJG9 635 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PAOXQ6QHF9 649 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PRR23CQ6ZRP0 262 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 Q6ZS46 218 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 USP48Q86UV5 1035 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 FAM20CQ8IXL6 584 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 GOLM1Q8NBJ4 401 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SMG8Q8ND04 991 aaKnown RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PHC3Q8NDX5 983 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ARMC5Q96C12 935 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 FAM46AQ96IP4 442 aaKnown RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ZNF496Q96IT1 587 aaPredicted RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CCDC136Q96JN2 1154 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 TBC1D32Q96NH3 1257 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 FANCD2OSQ96PS1 177 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 DPH2Q9BQC3 489 aaPredicted RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 ATXN3LQ9H3M9 355 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SLC52A2Q9HAB3 445 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 SUGCTQ9HAC7 445 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CWC22Q9HCG8 908 aaKnown RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 KRT82Q9NSB4 513 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 CCNL1Q9UK58 526 aaPredicted RBP3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 RAXQ9Y2V3 346 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 USP16Q9Y5T5 823 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 PNPLA7Q6ZV29 1317 aa3.32□□□□□ -1.88
TNFRSF1A-210ENST00000537842 MYBBP1AQ9BQG0 1328 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms