RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 ROBO3Q96MS0 1386 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 TTC26A0AVF1 554 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 LGALS16A8MUM7 142 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 PES1O00541 588 aaKnown RBP16.1■□□□□ 0.17
USP44-203ENST00000537435 TFRCP02786 760 aaKnown RBP16.1■□□□□ 0.17
USP44-203ENST00000537435 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 BRD3Q15059 726 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 ANKZF1Q9H8Y5 726 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 KBTBD4Q9NVX7 518 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 ERICH4A6NGS2 130 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 RHOBTB3O94955 611 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 BAG3O95817 575 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 OAS2P29728 719 aaKnown RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 STIM1Q13586 685 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 LONRF2Q1L5Z9 754 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 TRIM47Q96LD4 638 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 THAP9Q9H5L6 903 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 MYO1AQ9UBC5 1043 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 CCDC88AQ3V6T2 1871 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 LAD1O00515 517 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 PSMA7O14818 248 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 ZBTB22O15209 634 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 MYL1P05976 194 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 GIMAP8Q8ND71 665 aaPredicted RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 OR8K1Q8NGG5 319 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 EPN1Q9Y6I3 576 aaPredicted RBP16.09■□□□□ 0.17
USP44-203ENST00000537435 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
USP44-203ENST00000537435 NDUFA10O95299 355 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 RASA1P20936 1047 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 GSTO1P78417 241 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 CPVLQ9H3G5 476 aa16.08■□□□□ 0.17
USP44-203ENST00000537435 REXO2Q9Y3B8 237 aaKnown RBP16.08■□□□□ 0.17
USP44-203ENST00000537435 A0A1W2PQC6 194 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 CYP2C19P33261 490 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 PRPHP41219 470 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 PPP4CP60510 307 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
USP44-203ENST00000537435 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
USP44-203ENST00000537435 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
USP44-203ENST00000537435 MYH8P13535 1937 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 PLCG1P19174 1290 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 NAPAP54920 295 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 TTI2Q6NXR4 508 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 CABP7Q86V35 215 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 MSANTD4Q8NCY6 345 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 PNKPQ96T60 521 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 ZCCHC17Q9NP64 241 aaKnown RBP16.07■□□□□ 0.16
USP44-203ENST00000537435 TRIM10Q9UDY6 481 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
USP44-203ENST00000537435 NFIXQ14938 502 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 WHAMMP3Q1A5X7 153 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 LETM2Q2VYF4 491 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
USP44-203ENST00000537435 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
USP44-203ENST00000537435 DNAJC7Q99615 494 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 ZMYND12Q9H0C1 365 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 RAB21Q9UL25 225 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 CAPN11Q9UMQ6 739 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 GUCA1BQ9UMX6 200 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 FLT1P17948 1338 aa16.07■□□□□ 0.16
USP44-203ENST00000537435 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 B4DLN1 442 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 DUSP9Q99956 384 aaKnown RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CCNT1O60563 726 aaKnown RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 LDHCP07864 332 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 AMPD2Q01433 879 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 GRAPQ13588 217 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 HNRNPLLQ8WVV9 542 aaKnown RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 DHTKD1Q96HY7 919 aaPredicted RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 AK8Q96MA6 479 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 SPZ1Q9BXG8 430 aa16.06■□□□□ 0.16
USP44-203ENST00000537435 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
USP44-203ENST00000537435 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms