RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 CCDC63Q8NA47 563 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 RHPN1Q8TCX5 695 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 CAPZA3Q96KX2 299 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 PCDHGC5Q9Y5F6 944 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 STXBP3O00186 592 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 MGRN1O60291 552 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 DNAJC8O75937 253 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 YEATS4O95619 227 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 SCTRP47872 440 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 XRCC4Q13426 336 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 ITPK1Q13572 414 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 EMBQ6PCB8 327 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 PNMA8AQ86V59 439 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 GSPT2Q8IYD1 628 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 ANKRD2Q9GZV1 360 aa12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 IQCGQ9H095 443 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-207ENST00000537408 CPLX1O14810 134 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 CTCFP49711 727 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 CYFIP2Q96F07 1278 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 GORASP1Q9BQQ3 440 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 H7C1D1 291 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 SFSWAPQ12872 951 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 EAPPQ56P03 285 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 FAM228AQ86W67 206 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 OSBPL1AQ9BXW6 950 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 GUCY1A3Q02108 690 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 KCTD16Q68DU8 428 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 PLEKHG4BQ96PX9 1271 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 GRM8O00222 908 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 NFIXQ14938 502 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 TRIM42Q8IWZ5 723 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 RMI1Q9H9A7 625 aa12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-207ENST00000537408 ECEL1O95672 775 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 TOB2Q14106 344 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 HSP90AA4PQ58FG1 418 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 FAM114A1Q8IWE2 563 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 ANKS4BQ8N8V4 417 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 ZFAND2BQ8WV99 257 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 KDRP35968 1356 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 H7C1W4 665 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 CLTAP09496 248 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 GHRP10912 638 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 BLMHQ13867 455 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 GKAP1Q5VSY0 366 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 RAD9BQ6WBX8 426 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 AENQ8WTP8 325 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 EPAS1Q99814 870 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 BLOC1S6Q9UL45 172 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 B4DLN1 442 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 PDE8AO60658 829 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 ATP4AP20648 1035 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 ELF3P78545 371 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 CYP26C1Q6V0L0 522 aa12.05□□□□□ -0.48
CLSTN3-207ENST00000537408 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 CFAP73A6NFT4 308 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 BBOX1O75936 387 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 VAV2P52735 878 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 GRM1Q13255 1194 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 MAP4K1Q92918 833 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 NUP58Q9BVL2 599 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 ABCC6O95255 1503 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 PFKFB1P16118 471 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 CMA1P23946 247 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 RNF168Q8IYW5 571 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 GALNT15Q8N3T1 639 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 ARL8AQ96BM9 186 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 CTAGE1Q96RT6 745 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 MOV10L1Q9BXT6 1211 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 CCDC8Q9H0W5 538 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 GGA1Q9UJY5 639 aa12.04□□□□□ -0.48
CLSTN3-207ENST00000537408 RGPD8O14715 1765 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms