RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SLFN13Q68D06 897 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 KLHDC9Q8NEP7 349 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 MKL1Q969V6 931 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 GAS2L1Q99501 681 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-203ENST00000537194 SEZ6LQ9BYH1 1024 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 AP5M1Q9H0R1 490 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 NAPBQ9H115 298 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 SLC38A10Q9HBR0 1119 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 HOMER2Q9NSB8 354 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 GREB1LQ9C091 1923 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 DNAJC25-GNG10A0A024R161 153 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 TMEM232C9JQI7 657 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 SMIM22K7EJ46 135 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 ARVCFO00192 962 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 PRDM1O75626 825 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 CABYRO75952 493 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 SNAI1O95863 264 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 ASGR1P07306 291 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 SLC1A4P43007 532 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 CCDC144BQ3MJ40 725 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 MFSD5Q6N075 450 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 PSRC1Q6PGN9 363 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 ARMCX2Q7L311 632 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 GMCL1P1Q8NEA9 526 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 OSBP2Q969R2 916 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 LENG1Q96BZ8 264 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 TIFAQ96CG3 184 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 FSD1Q9BTV5 496 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMAD3-203ENST00000537194 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 RIPK3Q9Y572 518 aa10.61□□□□□ -0.71
SMAD3-203ENST00000537194 TSPY2A6NKD2 308 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 CHGBP05060 677 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 DNAJB2P25686 324 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 GJA9P57773 515 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 TFAP4Q01664 338 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 IFNL3Q8IZI9 196 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
SMAD3-203ENST00000537194 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 NEDD1Q8NHV4 660 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 STAG1Q8WVM7 1258 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 TTYH1Q9H313 450 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-203ENST00000537194 ZNF576Q9H609 170 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
SMAD3-203ENST00000537194 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 ALAS1P13196 640 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 ITGB8P26012 769 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 RAB30Q15771 203 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
SMAD3-203ENST00000537194 UPF3AQ9H1J1 476 aaKnown RBP10.59□□□□□ -0.71
SMAD3-203ENST00000537194 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 TBX21Q9UL17 535 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
SMAD3-203ENST00000537194 NCOR1O75376 2440 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 LAMA2P24043 3122 aaKnown RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 PLIN4Q96Q06 1357 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 MCCP23508 829 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 PPARAQ07869 468 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 IQSEC1Q6DN90 963 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 CCSAPQ6IQ19 270 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 RPUSD2Q8IZ73 545 aaKnown RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.724e-11■□□□□ 10.3
SMAD3-203ENST00000537194 PPP1R12CQ9BZL4 782 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 TOMM22Q9NS69 142 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 ADD3Q9UEY8 706 aaKnown RBP10.58□□□□□ -0.72
SMAD3-203ENST00000537194 PNMA2Q9UL42 364 aa10.58□□□□□ -0.72
SMAD3-203ENST00000537194 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 MYADML2A6NDP7 307 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 B4DLN1 442 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 M0R2C6 588 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-203ENST00000537194 RANBP6O60518 1105 aaKnown RBP10.57□□□□□ -0.72
SMAD3-203ENST00000537194 PLA2G6O60733 806 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 FGBP02675 491 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 CSF2RAP15509 400 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 CDK7P50613 346 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 MRPL12P52815 198 aaKnown RBP10.57□□□□□ -0.72
SMAD3-203ENST00000537194 EPHB4P54760 987 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 CCDC96Q2M329 555 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 TMEM240Q5SV17 173 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 TSHZ3Q63HK5 1081 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 RCSD1Q6JBY9 416 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 NSMFQ6X4W1 530 aa10.57□□□□□ -0.72
SMAD3-203ENST00000537194 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms