RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MAGEA1P43355 309 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MRPS25P82663 173 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MRPS35P82673 323 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CALCOCO2Q13137 446 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 SESTD1Q86VW0 696 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MYL10Q9BUA6 226 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 IQCGQ9H095 443 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 TRPC5Q9UL62 973 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 UTP11Q9Y3A2 253 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 HYOU1Q9Y4L1 999 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MED23Q9ULK4 1368 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 A0A1B0GTH6 734 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CETN3O15182 167 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ZPR1O75312 459 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 STAMBPO95630 424 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CTNNA2P26232 953 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 VSNL1P62760 191 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 EIF4A2Q14240 407 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 NCAPHQ15003 741 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 APBB1IPQ7Z5R6 666 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 IFIH1Q9BYX4 1025 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CHCHD3Q9NX63 227 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 N4BP2Q86UW6 1770 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 HIBCHQ6NVY1 386 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MREGQ8N565 214 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF579Q8NAF0 562 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ZFAND2BQ8WV99 257 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 DSCC1Q9BVC3 393 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 FESP07332 822 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 GUCY2DQ02846 1103 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 DIXDC1Q155Q3 683 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 UHMK1Q8TAS1 419 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 VCX3BQ9H321 246 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 VCX3AQ9NNX9 186 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 RPL26L1Q9UNX3 145 aaKnown RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 IKBKGQ9Y6K9 419 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 AGLP35573 1532 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 WASLO00401 505 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RASSF9O75901 435 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF76P36508 570 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PDE1CQ14123 709 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 DBN1Q16643 649 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TBC1D1Q86TI0 1168 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 DIS3L2Q8IYB7 885 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 XAGE2Q96GT9 111 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 DPH5Q9H2P9 285 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 GSTA5Q7RTV2 222 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC197Q8NCU1 140 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PIK3R5Q8WYR1 880 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ZKSCAN3Q9BRR0 538 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RAB34Q9BZG1 259 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 A0A0D9SFI3 127 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KCNJ18B7U540 433 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TXNDC9O14530 226 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 GSTA2P09210 222 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PLCD1P51178 756 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KCNJ12Q14500 433 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RILPL1Q5EBL4 403 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 SPATA1Q5VX52 437 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PAPD7Q5XG87 772 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CCNI2Q6ZMN8 369 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CSGALNACT2Q8N6G5 542 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PHKBQ93100 1093 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ABTB1Q969K4 478 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TSC22D3Q99576 134 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 FAM167BQ9BTA0 163 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ZBTB3Q9H5J0 574 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KAT14Q9H8E8 782 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CRYBG1Q9Y4K1 1723 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 MFAP3LO75121 409 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CCND1P24385 295 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 CNGA1P29973 690 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 EIF3BP55884 814 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 XRCC4Q13426 336 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 RASIP1Q5U651 963 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TC2NQ8N9U0 490 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 MAML3Q96JK9 1138 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KDM4CQ9H3R0 1056 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KCNJ14Q9UNX9 436 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 MROH1Q8NDA8 1641 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 DNAJC8O75937 253 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ROR2Q01974 943 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TMEM132AQ24JP5 1023 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 AGXT2Q9BYV1 514 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 KRT23Q9C075 422 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 HELLSQ9NRZ9 838 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 ABCC12Q96J65 1359 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PECAM1P16284 738 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 TTF1Q15361 905 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 SPDYCQ5MJ68 293 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 NSUN7Q8NE18 718 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 PPP1R14BQ96C90 147 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 GSDMAQ96QA5 445 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 LARSQ9P2J5 1176 aaKnown RBP5.94□□□□□ -1.46
PTPRD-213ENST00000537002 MAGEA8P43361 318 aa5.94□□□□□ -1.46
PTPRD-213ENST00000537002 SFSWAPQ12872 951 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms