RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 DUSP11O75319 330 aaKnown RBP23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ACLYP53396 1101 aa23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 IKQ13123 557 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 NUP133Q8WUM0 1156 aa23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 STAG1Q8WVM7 1258 aa23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ABHD16BQ9H3Z7 469 aa23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 STARD7Q9NQZ5 370 aa23.33■■□□□ 1.33
TNFRSF1B-204ENST00000536782 MOXD2PA6NHM9 499 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 PQBP1O60828 265 aaKnown RBP23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 MCCP23508 829 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 C9orf50Q5SZB4 431 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 KLHDC9Q8NEP7 349 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 GUCD1Q96NT3 240 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CRBNQ96SW2 442 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ACAD9Q9H845 621 aa23.32■■□□□ 1.32
TNFRSF1B-204ENST00000536782 KCNA10Q16322 511 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ARMCX2Q7L311 632 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CHMP4CQ96CF2 233 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 FGD4Q96M96 766 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 INCENPQ9NQS7 918 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 IL17RBQ9NRM6 502 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 HELLSQ9NRZ9 838 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ANAPC4Q9UJX5 808 aa23.31■■□□□ 1.32
TNFRSF1B-204ENST00000536782 KIAA0355O15063 1070 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 PLA2G6O60733 806 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 PDE1AP54750 535 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 TKFCQ3LXA3 575 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CCDC144BQ3MJ40 725 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 RCSD1Q6JBY9 416 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 AGBL1Q96MI9 1066 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 TOX2Q96NM4 488 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 SPC25Q9HBM1 224 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 RNF146Q9NTX7 359 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 TMEM39AQ9NV64 488 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ZNF536O15090 1300 aa23.3■■□□□ 1.32
TNFRSF1B-204ENST00000536782 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 RANBP6O60518 1105 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 NMT2O60551 498 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 C6orf222P0C671 652 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 RAG1P15918 1043 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ITGB8P26012 769 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CST5P28325 142 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 HDAC1Q13547 482 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ZNF697Q5TEC3 545 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 KCTD1Q719H9 257 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ANKRD33Q7Z3H0 272 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CCDC144CPQ8IYA2 1237 aa23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 PCSK9Q8NBP7 692 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1B-204ENST00000536782 MYADML2A6NDP7 307 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CNTN2Q02246 1040 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ALX1Q15699 326 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 FAM133AQ8N9E0 248 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 GLT1D1Q96MS3 346 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 FAM161BQ96MY7 647 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 TRERF1Q96PN7 1200 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 A1CFQ9NQ94 594 aaKnown RBP23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 VCANP13611 3396 aa23.28■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ADCY6O43306 1168 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ORC4O43929 436 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ALAS1P13196 640 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 GJA9P57773 515 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 FAAP100Q0VG06 881 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 CCDC174Q6PII3 467 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 UPF3AQ9H1J1 476 aaKnown RBP23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 PRR12Q9ULL5 1215 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ELP1O95163 1332 aa23.27■■□□□ 1.32
TNFRSF1B-204ENST00000536782 ASB14A6NK59 587 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 ASGR1P07306 291 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 FGRP09769 529 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 MCMDC2Q4G0Z9 681 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TICAM2Q86XR7 235 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 KATNBL1Q9H079 304 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TOMM22Q9NS69 142 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 MTMR7Q9Y216 660 aa23.26■■□□□ 1.31
TNFRSF1B-204ENST00000536782 FGAP02671 866 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 NOVP48745 357 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 SNAP25P60880 206 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 IRX5P78411 483 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 SMAD3P84022 425 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 FPGSQ05932 587 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 GNASQ5JWF2 1037 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 RASGRP2Q7LDG7 609 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 DCAF4Q8WV16 495 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 FAM227BQ96M60 508 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 MROH7Q68CQ1 1323 aa23.25■■□□□ 1.31
TNFRSF1B-204ENST00000536782 MYO9BQ13459 2157 aa23.24■■□□□ 1.31
TNFRSF1B-204ENST00000536782 A0A0D9SFI3 127 aa23.24■■□□□ 1.31
TNFRSF1B-204ENST00000536782 SOWAHBA6NEL2 793 aa23.24■■□□□ 1.31
TNFRSF1B-204ENST00000536782 CCDC96Q2M329 555 aa23.24■■□□□ 1.31
TNFRSF1B-204ENST00000536782 RNPC3Q96LT9 517 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1B-204ENST00000536782 CDK7P50613 346 aa23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 EPHB4P54760 987 aa23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 TNFAIP2Q03169 654 aa23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 MUM1L1Q5H9M0 696 aa23.23■■□□□ 1.31
TNFRSF1B-204ENST00000536782 RRP12Q5JTH9 1297 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms