RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SGSM2O43147 1006 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SNAP25P60880 206 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 BTNL9Q6UXG8 535 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 DGKHQ86XP1 1220 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ZSWIM5Q9P217 1185 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 FBXO40Q9UH90 709 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TRIOBPQ9H2D6 2365 aa21■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SEPT4O43236 478 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SNHG28P0DPA3 235 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 COL6A1P12109 1028 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SLC16A2P36021 539 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 IQCA1Q86XH1 822 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 DDX11Q96FC9 970 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 HOMER2Q9NSB8 354 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 FRMPD2Q68DX3 1309 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 CCDC174Q6PII3 467 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 FGD4Q96M96 766 aa20.99■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ZNF543Q08ER8 600 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ANKRD35Q8N283 1001 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ANKS1AQ92625 1134 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 KRT23Q9C075 422 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 RANBP17Q9H2T7 1088 aaKnown RBP20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ACAD9Q9H845 621 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 GPCPD1Q9NPB8 672 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 RNF146Q9NTX7 359 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
TNFRSF1A-209ENST00000536717 CYP21A2P08686 494 aa20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TAL1P17542 331 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SYDE2Q5VT97 1194 aa20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 MAMDC4Q6UXC1 1216 aa20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ZSCAN10Q96SZ4 725 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 CNNM2Q9H8M5 875 aa20.97■□□□□ 0.95
TNFRSF1A-209ENST00000536717 EVI5O60447 810 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ZNF865P0CJ78 1059 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ALAS1P13196 640 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TKFCQ3LXA3 575 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 ZNF467Q7Z7K2 595 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 PNMA1Q8ND90 353 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TRERF1Q96PN7 1200 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 A1CFQ9NQ94 594 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TNKSO95271 1327 aa20.96■□□□□ 0.95
TNFRSF1A-209ENST00000536717 SNAI1O95863 264 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ICAM1P05362 532 aa20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 MUM1L1Q5H9M0 696 aa20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 NR2E3Q9Y5X4 410 aa20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 SYNGAP1Q96PV0 1343 aa20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CYB5R4Q7L1T6 521 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 FAM133AQ8N9E0 248 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CCPG1Q9ULG6 757 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 TAF6LQ9Y6J9 622 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 LRRC37A2A6NM11 1700 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 DNM1LO00429 736 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CNTN2Q02246 1040 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 KAT14Q9H8E8 782 aa20.94■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CDC45O75419 566 aa20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 SEC23AQ15436 765 aa20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 GPATCH4Q5T3I0 446 aaKnown RBP20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 GJC2Q5T442 439 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CPVLQ9H3G5 476 aa20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 COLQQ9Y215 455 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CNPY2Q9Y2B0 182 aa20.93■□□□□ 0.94
TNFRSF1A-209ENST00000536717 UBAC1Q9BSL1 405 aa20.92■□□□□ 0.94
TNFRSF1A-209ENST00000536717 POTEB2H3BUK9 544 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 AKR1A1P14550 325 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 LRRC26Q2I0M4 334 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ARMCX2Q7L311 632 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 C7orf61Q8IZ16 206 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ARRDC4Q8NCT1 418 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 SENP6Q9GZR1 1112 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 UBA5Q9GZZ9 404 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CYP39A1Q9NYL5 469 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 RBM8AQ9Y5S9 174 aaKnown RBP20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ASTN1O14525 1302 aa20.91■□□□□ 0.94
TNFRSF1A-209ENST00000536717 SOWAHBA6NEL2 793 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 E7EWF7 191 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 RARBP10826 455 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 TRDNQ13061 729 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 LRRC41Q15345 812 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 HABP4Q5JVS0 413 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 IFIT1BQ5T764 474 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CHRDL2Q6WN34 429 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 LENG1Q96BZ8 264 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 ESYT1Q9BSJ8 1104 aa20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 LSG1Q9H089 658 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-209ENST00000536717 NFIBO00712 420 aa20.89■□□□□ 0.94
TNFRSF1A-209ENST00000536717 NSMFQ6X4W1 530 aa20.89■□□□□ 0.94
TNFRSF1A-209ENST00000536717 KATNBL1Q9H079 304 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms