RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 FCGRTP55899 365 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 PRKCZQ05513 592 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 C11orf57Q6ZUT1 292 aaPredicted RBP13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 TXLNBQ8N3L3 684 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 ZNF280CQ8ND82 737 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 SDF4Q9BRK5 362 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 FLT1P17948 1338 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
CHRNB1-202ENST00000536404 MAST2Q6P0Q8 1798 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 IGSF3O75054 1194 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 GRK4P32298 578 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 HMGCS2P54868 508 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 CCZ1BP86790 482 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 SF3A1Q15459 793 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 MIGA1Q8NAN2 632 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 DHX36Q9H2U1 1008 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 DNAJC18Q9H819 358 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 MGAMO43451 1857 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 CDK5RAP2Q96SN8 1893 aa13.22□□□□□ -0.29
CHRNB1-202ENST00000536404 CYP2C19P33261 490 aa13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 ICE2Q659A1 982 aa13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 FOXP4Q8IVH2 680 aaPredicted RBP13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
CHRNB1-202ENST00000536404 GDF11O95390 407 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 EVCP57679 992 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 METTL16Q86W50 562 aaKnown RBP13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 CNPY4Q8N129 248 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 AOPEPQ8N6M6 819 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 USP28Q96RU2 1077 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.3
CHRNB1-202ENST00000536404 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 IKBKBO14920 756 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 CCL5P13501 91 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 FLT3LGP49771 235 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 STK38Q15208 465 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 L2HGDHQ9H9P8 463 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 KIAA1468Q9P260 1216 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
CHRNB1-202ENST00000536404 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 KIF1CO43896 1103 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 ZFYP08048 801 aaPredicted RBP13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 USP5P45974 858 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 NLRP12P59046 1061 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 RAD51AP2Q09MP3 1159 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 MTMR2Q13614 643 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 GOLPH3LQ9H4A5 285 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 PAG1Q9NWQ8 432 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 RSPH14Q9UHP6 348 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 FOCADQ5VW36 1801 aa13.19□□□□□ -0.3
CHRNB1-202ENST00000536404 PHLPP2Q6ZVD8 1323 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 GOLGA6L9A6NEM1 432 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 ADCY3O60266 1144 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 ASNSP08243 561 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 ELNP15502 786 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 BACE1P56817 501 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
CHRNB1-202ENST00000536404 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms