RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 OAZ1P54368 228 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 EPHB4P54760 987 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ARMCX2Q7L311 632 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TMEM199Q8N511 208 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 KLHDC9Q8NEP7 349 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CEP95Q96GE4 821 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SLC38A10Q9HBR0 1119 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 DNAJC25-GNG10A0A024R161 153 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MYADML2A6NDP7 307 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 STAT2P52630 851 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CCDC144BQ3MJ40 725 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SLFN13Q68D06 897 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MFSD5Q6N075 450 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PSRC1Q6PGN9 363 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GMCL1P1Q8NEA9 526 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 OSBP2Q969R2 916 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GAS2L1Q99501 681 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 NAPBQ9H115 298 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MTMR4Q9NYA4 1195 aa15.43■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GJA9P57773 515 aa15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.061e-12■□□□□ 11.1
TNFRSF1A-207ENST00000535958 PPP1R12CQ9BZL4 782 aa15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 EPB41L4AQ9HCS5 686 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TBX21Q9UL17 535 aa15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CDH23Q9H251 3354 aa15.42■□□□□ 0.06
TNFRSF1A-207ENST00000535958 IGKV6D-41A0A0C4DH26 115 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 M0R2C6 588 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ARVCFO00192 962 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ERC2O15083 957 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SLC1A4P43007 532 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TSHZ3Q63HK5 1081 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 FAM160B2Q86V87 743 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CHURC1Q8WUH1 139 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MKL1Q969V6 931 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ZNF576Q9H609 170 aa15.41■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ASB14A6NK59 587 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PATL2C9JE40 543 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ZEB2O60315 1214 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TNFAIP2Q03169 654 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 AP5M1Q9H0R1 490 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 RNF146Q9NTX7 359 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 STX8Q9UNK0 236 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 MCM3APO60318 1980 aa15.4■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CABYRO75952 493 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ALAS1P13196 640 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CSF2RAP15509 400 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TFAP4Q01664 338 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TKFCQ3LXA3 575 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TLK2Q86UE8 772 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 NEDD1Q8NHV4 660 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 MSRAQ9UJ68 235 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 EYSQ5T1H1 3165 aa15.39■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TSPY2A6NKD2 308 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CDK7P50613 346 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 IRX5P78411 483 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 BEX3Q00994 111 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PPARAQ07869 468 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 RAB30Q15771 203 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TJAP1Q5JTD0 557 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TMEM240Q5SV17 173 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FAM126BQ8IXS8 530 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 STAG1Q8WVM7 1258 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PPM1EQ8WY54 764 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CHMP4CQ96CF2 233 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TRERF1Q96PN7 1200 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 VCANP13611 3396 aa15.38■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ADCY6O43306 1168 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ACRP10323 421 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CXCL17Q6UXB2 119 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ZNF365Q70YC5 407 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 IL27Q8NEV9 243 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FGD4Q96M96 766 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 AGBL1Q96MI9 1066 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PBX4Q9BYU1 374 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 IL23AQ9NPF7 189 aa15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 A1CFQ9NQ94 594 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-207ENST00000535958 MTMR7Q9Y216 660 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms