RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TTC38Q5R3I4 469 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 USP25Q9UHP3 1055 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 HDAC9Q9UKV0 1011 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 PITPNM2Q9BZ72 1349 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 ZBTB5O15062 677 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 RAD17O75943 681 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 EGFRP00533 1210 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 BMP6P22004 513 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 ME1P48163 572 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 TNIP1Q15025 636 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CNNM4Q6P4Q7 775 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 PIGSQ96S52 555 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 ZBTB12Q9Y330 459 aaPredicted RBP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 TRIM75PA6NK02 468 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CDC25BP30305 580 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 MOXD1Q6UVY6 613 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 C11orf57Q6ZUT1 292 aaPredicted RBP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 LRRC15Q8TF66 581 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 ZBTB9Q96C00 473 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 RRP36Q96EU6 259 aaKnown RBP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 CSRNP2Q9H175 543 aa9.13□□□□□ -0.95
COL21A1-212ENST00000535941 RANBP17Q9H2T7 1088 aaKnown RBP9.13□□□□□ -0.95
COL21A1-212ENST00000535941 ZNF236Q9UL36 1845 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 GOLGA8HP0CJ92 632 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 ABCB5Q2M3G0 1257 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 P2RX7Q99572 595 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CLIP2Q9UDT6 1046 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 ZBTB21Q9ULJ3 1066 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 SLC26A4O43511 780 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CAP2P40123 477 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 RASSF7Q02833 373 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 SEPT2Q15019 361 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 STX1AQ16623 288 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 LONRF3Q496Y0 759 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 KRT25Q7Z3Z0 450 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CCDC12Q8WUD4 166 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 FBXW7Q969H0 707 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 MTRQ99707 1265 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 ZSWIM8A7E2V4 1837 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 LONP1P36776 959 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 NLRP12P59046 1061 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 MORC3Q14149 939 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 DLGAP5Q15398 846 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 NBPF9Q3BBW0 867 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CSRNP1Q96S65 589 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CCSER1Q9C0I3 900 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 ZNF219Q9P2Y4 722 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-212ENST00000535941 KCNG1Q9UIX4 513 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
COL21A1-212ENST00000535941 NDUFB10O96000 172 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 MARCKSP29966 332 aaPredicted RBP9.11□□□□□ -0.95
COL21A1-212ENST00000535941 AKAP17AQ02040 695 aaKnown RBP9.11□□□□□ -0.95
COL21A1-212ENST00000535941 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 HYIQ5T013 277 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 CCDC73Q6ZRK6 1079 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 G3V3G9 751 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 MEIS2O14770 477 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL21A1-212ENST00000535941 ICA1Q05084 483 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 DPYDQ12882 1025 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 COBLL1Q53SF7 1204 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 USP49Q70CQ1 688 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 CPVLQ9H3G5 476 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 NOL7Q9UMY1 257 aaKnown RBP9.11□□□□□ -0.95
COL21A1-212ENST00000535941 PPP2R3BQ9Y5P8 575 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
COL21A1-212ENST00000535941 FRMPD2Q68DX3 1309 aaPredicted RBP9.11□□□□□ -0.95
COL21A1-212ENST00000535941 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 IKBKBO14920 756 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 TCP10Q12799 353 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 PTGDRQ13258 359 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 TAF3Q5VWG9 929 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 PIK3AP1Q6ZUJ8 805 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 TRIML1Q8N9V2 468 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 TMEM39BQ9GZU3 492 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 F5H6K3 240 aa9.1□□□□□ -0.95
COL21A1-212ENST00000535941 GNA11P29992 359 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms