RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF772Q68DY9 489 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-202ENST00000535906 C2CD5Q86YS7 1000 aa15.13■□□□□ 0.01
VPS33B-202ENST00000535906 SYNRGQ9UMZ2 1314 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 TTLL1O95922 423 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 STAT6P42226 847 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 CRKP46108 304 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 NONOQ15233 471 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 LETM2Q2VYF4 491 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 APTXQ7Z2E3 356 aaKnown RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 KRT25Q7Z3Z0 450 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 TMX1Q9H3N1 280 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 LAD1O00515 517 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 CCP110O43303 1012 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 NR1I3Q14994 352 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 ASPRV1Q53RT3 343 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 SOGA3Q5TF21 947 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 KIAA0825Q8IV33 1275 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
VPS33B-202ENST00000535906 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 BIN2Q9UBW5 565 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-202ENST00000535906 COBLO75128 1261 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 PRPHP41219 470 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 CACNB3P54284 484 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 NAA30Q147X3 362 aaPredicted RBP15.11■□□□□ 0.01
VPS33B-202ENST00000535906 COA7Q96BR5 231 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 PLIN2Q99541 437 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
VPS33B-202ENST00000535906 SCN9AQ15858 1988 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 UBA7P41226 1012 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 CDKAL1Q5VV42 579 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 JAKMIP3Q5VZ66 844 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 SPECC1LQ69YQ0 1117 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 SMAP1Q8IYB5 467 aaPredicted RBP15.11■□□□□ 0.01
VPS33B-202ENST00000535906 TBCKQ8TEA7 893 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 LRRC15Q8TF66 581 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 ERO1AQ96HE7 468 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
VPS33B-202ENST00000535906 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 MYO3BQ8WXR4 1341 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 ESYT2A0FGR8 921 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 H0YIN7 160 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 RPN1P04843 607 aaKnown RBP15.1■□□□□ 0.01
VPS33B-202ENST00000535906 RRAGBQ5VZM2 374 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 NEK8Q86SG6 692 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 REXO1Q8N1G1 1221 aaKnown RBP15.1■□□□□ 0.01
VPS33B-202ENST00000535906 CCSER1Q9C0I3 900 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
VPS33B-202ENST00000535906 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
VPS33B-202ENST00000535906 TEX33O43247 280 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 SLU7O95391 586 aaKnown RBP15.09■□□□□ 0.01
VPS33B-202ENST00000535906 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 OR52Z1P0C646 297 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 CHRNA5P30532 468 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 TCP10Q12799 353 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 TMEM139Q8IV31 216 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 RASSF8Q8NHQ8 419 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 FEZ1Q99689 392 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 ECE2O60344 883 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 ZNF658Q5TYW1 1059 aaPredicted RBP15.09■□□□□ 0.01
VPS33B-202ENST00000535906 STRIP1Q5VSL9 837 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 TTBK2Q6IQ55 1244 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 JMJD4Q9H9V9 463 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 GDAQ9Y2T3 454 aa15.09■□□□□ 0.01
VPS33B-202ENST00000535906 FAM196BA6NMK8 535 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 hCG_1984214I3L0E3 225 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 ATP2B2Q01814 1243 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 STYK1Q6J9G0 422 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 SYT10Q6XYQ8 523 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 FCHSD1Q86WN1 690 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 ADGRF4Q8IZF3 695 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 ZNF713Q8N859 430 aaPredicted RBP15.08■□□□□ 0.01
VPS33B-202ENST00000535906 TC2NQ8N9U0 490 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 MAPK8IP1Q9UQF2 711 aa15.08■□□□□ 0.01
VPS33B-202ENST00000535906 GREB1LQ9C091 1923 aaPredicted RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 RBM5P52756 815 aaKnown RBP eCLIP15.08■□□□□ 0
VPS33B-202ENST00000535906 ADKP55263 362 aaKnown RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 CBX1P83916 185 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 SHROOM1Q2M3G4 852 aaPredicted RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 ZMYND15Q9H091 742 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 EHD4Q9H223 541 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 KBTBD4Q9NVX7 518 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 RMND1Q9NWS8 449 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0
VPS33B-202ENST00000535906 MYH4Q9Y623 1939 aa15.08■□□□□ 0
VPS33B-202ENST00000535906 EDIL3O43854 480 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 SLC16A2P36021 539 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 TECP42680 631 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 PRCPP42785 496 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms