RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 BICD2Q8TD16 824 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 OXER1Q8TDS5 423 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 COA7Q96BR5 231 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 SLF1Q9BQI6 1058 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 AMNQ9BXJ7 453 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 LOC285556D6RIA3 1793 aa26.31■■□□□ 1.8
RBFOX1-206ENST00000535565 PPP1R11O60927 126 aaPredicted RBP26.31■■□□□ 1.8
RBFOX1-206ENST00000535565 FBXO11Q86XK2 927 aa26.31■■□□□ 1.8
RBFOX1-206ENST00000535565 OTUD5Q96G74 571 aa26.31■■□□□ 1.8
RBFOX1-206ENST00000535565 GBA2Q9HCG7 927 aaPredicted RBP26.31■■□□□ 1.8
RBFOX1-206ENST00000535565 FMR1Q06787 632 aaKnown RBP eCLIP26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 PPIL2Q13356 520 aa26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 C2orf69Q8N8R5 385 aa26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 RANBP17Q9H2T7 1088 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 FBXO28Q9NVF7 368 aa26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 TFIP11Q9UBB9 837 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 PCDHA1Q9Y5I3 950 aa26.3■■□□□ 1.8
RBFOX1-206ENST00000535565 FLOT1O75955 427 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 CELF2O95319 508 aaKnown RBP26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 ADCY7P51828 1080 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 NBR1Q14596 966 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 SAMD1Q6SPF0 538 aaPredicted RBP26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 CNKSR2Q8WXI2 1034 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 GDPD2Q9HCC8 539 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 CXCL11O14625 94 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 SNAP25P60880 206 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 RILPL1Q5EBL4 403 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 TMEM87AQ8NBN3 555 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 OPTNQ96CV9 577 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 SPATA32Q96LK8 384 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 GLT8D2Q9H1C3 349 aa26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 GPBP1L1Q9HC44 474 aaPredicted RBP26.29■■□□□ 1.8
RBFOX1-206ENST00000535565 PRPF40AO75400 957 aaKnown RBP26.28■■□□□ 1.8
RBFOX1-206ENST00000535565 TNFRSF25Q93038 417 aa26.28■■□□□ 1.8
RBFOX1-206ENST00000535565 SLC10A4Q96EP9 437 aa26.28■■□□□ 1.8
RBFOX1-206ENST00000535565 PPP1R9AQ9ULJ8 1098 aa26.28■■□□□ 1.8
RBFOX1-206ENST00000535565 IRF6O14896 467 aa26.27■■□□□ 1.8
RBFOX1-206ENST00000535565 FDX1P10109 184 aa26.27■■□□□ 1.8
RBFOX1-206ENST00000535565 CUL5Q93034 780 aa26.27■■□□□ 1.8
RBFOX1-206ENST00000535565 USP28Q96RU2 1077 aa26.27■■□□□ 1.8
RBFOX1-206ENST00000535565 NOL7Q9UMY1 257 aaKnown RBP26.27■■□□□ 1.8
RBFOX1-206ENST00000535565 USH1GQ495M9 461 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 CCDC174Q6PII3 467 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 PROCA1Q8NCQ7 364 aaPredicted RBP26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 RIC8AQ9NPQ8 531 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 LMBRD1Q9NUN5 540 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 POLR3EQ9NVU0 708 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 KCNH4Q9UQ05 1017 aa26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 CTDP1Q9Y5B0 961 aaPredicted RBP26.26■■□□□ 1.79
RBFOX1-206ENST00000535565 A0A0G2JLL6 359 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 CCDC194A0A1B0GVG4 234 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L15C9J2P7 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L13C9JLJ4 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L11C9JVI0 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L18D6R9N7 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L22D6RA61 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L17D6RBQ6 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L19D6RCP7 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L20D6RJB6 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 M0R2N6 131 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 ITGBL1O95965 494 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 MRPL12P52815 198 aaKnown RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 CEBPZQ03701 1054 aaKnown RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 USP17L24Q0WX57 530 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 PRRT2Q7Z6L0 340 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 REXO1Q8N1G1 1221 aaKnown RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 LEO1Q8WVC0 666 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 RTEL1Q9NZ71 1219 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 PCDHA6Q9UN73 950 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 PCDHA8Q9Y5H6 950 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 ELP1O95163 1332 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 RLFQ13129 1914 aa26.25■■□□□ 1.79
RBFOX1-206ENST00000535565 PIK3AP1Q6ZUJ8 805 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 PSTPIP2Q9H939 334 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 ANO1Q5XXA6 986 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 GADL1Q6ZQY3 521 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 CATSPERGQ6ZRH7 1159 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 KRT25Q7Z3Z0 450 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 FTOQ9C0B1 505 aaKnown RBP eCLIP26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 PNMA2Q9UL42 364 aa26.24■■□□□ 1.79
RBFOX1-206ENST00000535565 ZBED4O75132 1171 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 YEATS4O95619 227 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 COG2Q14746 738 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 RASGRP4Q8TDF6 673 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 SLC38A10Q9HBR0 1119 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 MYPNQ86TC9 1320 aa26.23■■□□□ 1.79
RBFOX1-206ENST00000535565 COL11A1P12107 1806 aaPredicted RBP26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 ICAM1P05362 532 aa26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 TRAPPC10P48553 1259 aa26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 NASPP49321 788 aaPredicted RBP26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 STK38Q15208 465 aa26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 RCOR1Q9UKL0 485 aa26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 CLIC4Q9Y696 253 aa26.22■■□□□ 1.79
RBFOX1-206ENST00000535565 ABCB11O95342 1321 aa26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 ADAMTS3O15072 1205 aa26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 SKOR2Q2VWA4 1001 aaPredicted RBP26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 EARS2Q5JPH6 523 aaKnown RBP26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 FASTKD5Q7L8L6 764 aaKnown RBP26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 HOXC10Q9NYD6 342 aa26.21■■□□□ 1.79
RBFOX1-206ENST00000535565 MRPL11Q9Y3B7 192 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms