RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 PGK2P07205 417 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 CYBAP13498 195 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 CHMLP26374 656 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 CENPQQ7L2Z9 268 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-204ENST00000535406 NECAB2Q7Z6G3 386 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-204ENST00000535406 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
CDCA3-204ENST00000535406 PAWRQ96IZ0 340 aaKnown RBP11.11□□□□□ -0.63
CDCA3-204ENST00000535406 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 B4E1Z4 1266 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 KDM4AO75164 1064 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 IGHA2P01877 340 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 LHX8Q68G74 356 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 IQCA1Q86XH1 822 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 CHST13Q8NET6 341 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 TTC14Q96N46 770 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 KRT23Q9C075 422 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 C11orf49Q9H6J7 331 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 CNNM2Q9H8M5 875 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 DDX20Q9UHI6 824 aaKnown RBP11.1□□□□□ -0.63
CDCA3-204ENST00000535406 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
CDCA3-204ENST00000535406 DIS3Q9Y2L1 958 aaKnown RBP11.1□□□□□ -0.63
CDCA3-204ENST00000535406 FRMPD2Q68DX3 1309 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-204ENST00000535406 PDHBP11177 359 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 CCDC174Q6PII3 467 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDCA3-204ENST00000535406 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ACAD9Q9H845 621 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ZNF536O15090 1300 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 H0YGN5 161 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 SGSM2O43147 1006 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 SEPT4O43236 478 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 EVI5O60447 810 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ALAS1P13196 640 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 SYDE2Q5VT97 1194 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-204ENST00000535406 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 UBAC1Q9BSL1 405 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 NRBP1Q9UHY1 535 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 NR2E3Q9Y5X4 410 aa11.09□□□□□ -0.63
CDCA3-204ENST00000535406 TNKSO95271 1327 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 ICAM1P05362 532 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 SNHG28P0DPA3 235 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 SLC16A2P36021 539 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 SNAP25P60880 206 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 PTH1RQ03431 593 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 TRDNQ13061 729 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 TKFCQ3LXA3 575 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 ANO1Q5XXA6 986 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
CDCA3-204ENST00000535406 ENAHQ8N8S7 591 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-204ENST00000535406 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
CDCA3-204ENST00000535406 KAT14Q9H8E8 782 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 ZSWIM5Q9P217 1185 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.64
CDCA3-204ENST00000535406 PFASO15067 1338 aa11.07□□□□□ -0.64
CDCA3-204ENST00000535406 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
CDCA3-204ENST00000535406 DNM1LO00429 736 aa11.07□□□□□ -0.64
CDCA3-204ENST00000535406 CYP21A2P08686 494 aa11.07□□□□□ -0.64
CDCA3-204ENST00000535406 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
CDCA3-204ENST00000535406 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
CDCA3-204ENST00000535406 MCM3APO60318 1980 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 KBTBD13C9JR72 458 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 RARBP10826 455 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 COL6A1P12109 1028 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 AKR1A1P14550 325 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 TAL1P17542 331 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-204ENST00000535406 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
CDCA3-204ENST00000535406 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 IFIT1BQ5T764 474 aaKnown RBP11.06□□□□□ -0.64
CDCA3-204ENST00000535406 MAMDC4Q6UXC1 1216 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
CDCA3-204ENST00000535406 SKAP1Q86WV1 359 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 C7orf61Q8IZ16 206 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 ARRDC4Q8NCT1 418 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms