RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 CAVIN4Q5BKX8 364 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 WDR93Q6P2C0 686 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 KIAA1328Q86T90 577 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 SAR1BQ9Y6B6 198 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 TAF1P21675 1872 aa11.51□□□□□ -0.57
DDB1-204ENST00000535147 KLRC4O43908 158 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 PRDX5P30044 214 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 INF2Q27J81 1249 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 ARL6IP4Q66PJ3 421 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 ANKRD18AQ8IVF6 992 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 NSUN4Q96CB9 384 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 CWC15Q9P013 229 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 CAPN11Q9UMQ6 739 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 TRIM21P19474 475 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 UBA7P41226 1012 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 ITPK1Q13572 414 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 DTHD1Q6ZMT9 781 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 SRLQ86TD4 932 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 FAM71BQ8TC56 605 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 MACROD2A1Z1Q3 448 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 ORC4O43929 436 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 RNF40O75150 1001 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 MYBL2P10244 700 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 SKIDA1Q1XH10 827 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 CELF1Q92879 486 aaKnown RBP11.5□□□□□ -0.57
DDB1-204ENST00000535147 JAKMIP2Q96AA8 810 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 TUBGCP2Q9BSJ2 902 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 TFCP2L1Q9NZI6 479 aa11.5□□□□□ -0.57
DDB1-204ENST00000535147 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 PSMA7O14818 248 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 SYF2O95926 243 aaKnown RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 USP17L8P0C7I0 530 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 DUSP9Q99956 384 aaKnown RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 MAGEC2Q9UBF1 373 aaPredicted RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 PCDHA4Q9UN74 947 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 MINPP1Q9UNW1 487 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 A0A1W2PQC6 194 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 CALML3P27482 149 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 SLC35G1Q2M3R5 365 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 BICDL1Q6ZP65 573 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 KRT26Q7Z3Y9 468 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
DDB1-204ENST00000535147 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
DDB1-204ENST00000535147 PLEKP08567 350 aaPredicted RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 PCP11498 1178 aaKnown RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 MRPS25P82663 173 aaKnown RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 TFAP4Q01664 338 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 GIMAP8Q8ND71 665 aaPredicted RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 CAGE1Q8TC20 777 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 TTYH3Q9C0H2 523 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 THAP9Q9H5L6 903 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 JADE2Q9NQC1 790 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 EXOC1Q9NV70 894 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 MCM9Q9NXL9 1143 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 HPCAL4Q9UM19 191 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 XIRP1Q702N8 1843 aaKnown RBP11.48□□□□□ -0.57
DDB1-204ENST00000535147 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 KRT86O43790 486 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 TUBBP07437 444 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 SRGNP10124 158 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 IDEP14735 1019 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 DNM2P50570 870 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 SIK1P57059 783 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 KRT83P78385 493 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 C2orf54Q08AI8 447 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 STK4Q13043 487 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 STIM1Q13586 685 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 CCDC178Q5BJE1 867 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 ANKRD40Q6AI12 368 aa11.48□□□□□ -0.57
DDB1-204ENST00000535147 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms