RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 CNMDO75829 334 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 PGK1P00558 417 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 CYP2C18P33260 490 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 RGS3P49796 1198 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 TAP1Q03518 808 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 GRB14Q14449 540 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 PKN1Q16512 942 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 SPRED2Q7Z698 418 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 ZSCAN29Q8IWY8 852 aaPredicted RBP12.6□□□□□ -0.39
TNC-209ENST00000534839 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 RMDN1Q96DB5 314 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 STARD7Q9NQZ5 370 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 TOR4AQ9NXH8 423 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 COL4A4P53420 1690 aaPredicted RBP12.6□□□□□ -0.39
TNC-209ENST00000534839 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 NEURL1BA8MQ27 555 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 M0R296 226 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
TNC-209ENST00000534839 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
TNC-209ENST00000534839 CASP7P55210 303 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 RIPK4P57078 832 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 ST3GAL2Q16842 350 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
TNC-209ENST00000534839 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 RNF180Q86T96 592 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 EDAQ92838 391 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 ZNF594Q96JF6 807 aaPredicted RBP12.59□□□□□ -0.39
TNC-209ENST00000534839 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
TNC-209ENST00000534839 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
TNC-209ENST00000534839 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
TNC-209ENST00000534839 ANP32CO43423 234 aa12.58□□□□□ -0.4
TNC-209ENST00000534839 TECTAO75443 2155 aa12.58□□□□□ -0.4
TNC-209ENST00000534839 VCPP55072 806 aaKnown RBP12.58□□□□□ -0.4
TNC-209ENST00000534839 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
TNC-209ENST00000534839 MCM6Q14566 821 aa12.58□□□□□ -0.4
TNC-209ENST00000534839 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
TNC-209ENST00000534839 UPF3BQ9BZI7 483 aaKnown RBP12.58□□□□□ -0.4
TNC-209ENST00000534839 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
TNC-209ENST00000534839 ATRXP46100 2492 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 ENTPD3O75355 529 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 DDX58O95786 925 aaKnown RBP12.57□□□□□ -0.4
TNC-209ENST00000534839 CDK7P50613 346 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 ACLYP53396 1101 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 GCKRQ14397 625 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 AGERQ15109 404 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 PRKRIP1Q9H875 184 aaPredicted RBP12.57□□□□□ -0.4
TNC-209ENST00000534839 CNNM1Q9NRU3 951 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
TNC-209ENST00000534839 J3QL48 77 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 RARBP10826 455 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 CCNA1P78396 465 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
TNC-209ENST00000534839 PDXDC2PQ6P474 469 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 ADHFE1Q8IWW8 467 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 CYP4X1Q8N118 509 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
TNC-209ENST00000534839 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
TNC-209ENST00000534839 LMCD1Q9NZU5 365 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 PRKAG3Q9UGI9 489 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 UMODL1Q5DID0 1318 aa12.56□□□□□ -0.4
TNC-209ENST00000534839 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 H3BQ06 376 aaPredicted RBP12.55□□□□□ -0.4
TNC-209ENST00000534839 NBL1P41271 181 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 BACE1P56817 501 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
TNC-209ENST00000534839 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 SNIP1Q8TAD8 396 aaKnown RBP12.55□□□□□ -0.4
TNC-209ENST00000534839 GDPD5Q8WTR4 605 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 NUP133Q8WUM0 1156 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 RABGAP1Q9Y3P9 1069 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 MROH7Q68CQ1 1323 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 BRWD1Q9NSI6 2320 aa12.55□□□□□ -0.4
TNC-209ENST00000534839 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 ADAMTS4O75173 837 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
TNC-209ENST00000534839 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
TNC-209ENST00000534839 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
TNC-209ENST00000534839 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms