RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CHMP4CQ96CF2 233 aa25.03■■□□□ 1.6
PKP3-211ENST00000534401 HMX1Q9NP08 348 aaPredicted RBP25.03■■□□□ 1.6
PKP3-211ENST00000534401 SLC5A4Q9NY91 659 aa25.03■■□□□ 1.6
PKP3-211ENST00000534401 MTMR7Q9Y216 660 aa25.03■■□□□ 1.6
PKP3-211ENST00000534401 PRKAR2AP13861 404 aaKnown RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 SLC16A2P36021 539 aa25.02■■□□□ 1.6
PKP3-211ENST00000534401 IKQ13123 557 aaPredicted RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 KCTD2Q14681 263 aa25.02■■□□□ 1.6
PKP3-211ENST00000534401 IFIT1BQ5T764 474 aaKnown RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 RALYLQ86SE5 291 aaKnown RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 MAML3Q96JK9 1138 aa25.02■■□□□ 1.6
PKP3-211ENST00000534401 AGBL1Q96MI9 1066 aa25.02■■□□□ 1.6
PKP3-211ENST00000534401 GPCPD1Q9NPB8 672 aa25.02■■□□□ 1.6
PKP3-211ENST00000534401 CTDP1Q9Y5B0 961 aaPredicted RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 FRMPD2Q68DX3 1309 aaPredicted RBP25.02■■□□□ 1.6
PKP3-211ENST00000534401 MKI67P46013 3256 aaKnown RBP25.01■■□□□ 1.59
PKP3-211ENST00000534401 ICAM1P05362 532 aa25.01■■□□□ 1.59
PKP3-211ENST00000534401 ASPRV1Q53RT3 343 aa25.01■■□□□ 1.59
PKP3-211ENST00000534401 MFSD14CQ5VZR4 134 aa25.01■■□□□ 1.59
PKP3-211ENST00000534401 KCNB2Q92953 911 aa25.01■■□□□ 1.59
PKP3-211ENST00000534401 COL9A3Q14050 684 aaPredicted RBP25■■□□□ 1.59
PKP3-211ENST00000534401 ISY1Q9ULR0 285 aaKnown RBP25■■□□□ 1.59
PKP3-211ENST00000534401 IFIT3O14879 490 aaKnown RBP24.99■■□□□ 1.59
PKP3-211ENST00000534401 DEFB118Q96PH6 123 aa24.99■■□□□ 1.59
PKP3-211ENST00000534401 SENP2Q9HC62 589 aa24.99■■□□□ 1.59
PKP3-211ENST00000534401 PNMA2Q9UL42 364 aa24.99■■□□□ 1.59
PKP3-211ENST00000534401 WDR19Q8NEZ3 1342 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 PGK2P07205 417 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 CYBAP13498 195 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 SNAP25P60880 206 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 TROAPQ12815 778 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 LHX8Q68G74 356 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 ZNF467Q7Z7K2 595 aaPredicted RBP24.98■■□□□ 1.59
PKP3-211ENST00000534401 MSL3Q8N5Y2 521 aaKnown RBP24.98■■□□□ 1.59
PKP3-211ENST00000534401 TRPV1Q8NER1 839 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 FGD4Q96M96 766 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 ACAD9Q9H845 621 aa24.98■■□□□ 1.59
PKP3-211ENST00000534401 PALM3A6NDB9 673 aaPredicted RBP24.97■■□□□ 1.59
PKP3-211ENST00000534401 EPB41L2O43491 1005 aaKnown RBP24.97■■□□□ 1.59
PKP3-211ENST00000534401 GOLGA8HP0CJ92 632 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 CCND3P30281 292 aaPredicted RBP24.97■■□□□ 1.59
PKP3-211ENST00000534401 CYP2C19P33261 490 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 SART3Q15020 963 aaKnown RBP24.97■■□□□ 1.59
PKP3-211ENST00000534401 RNF20Q5VTR2 975 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 MAMDC4Q6UXC1 1216 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 RASEFQ8IZ41 740 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 TRERF1Q96PN7 1200 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 RNF146Q9NTX7 359 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 NRBP1Q9UHY1 535 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 OGDHLQ9ULD0 1010 aa24.97■■□□□ 1.59
PKP3-211ENST00000534401 PARP1P09874 1014 aaKnown RBP24.96■■□□□ 1.59
PKP3-211ENST00000534401 MCM5P33992 734 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 WTAPQ15007 396 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 CCDC174Q6PII3 467 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 CHST3Q7LGC8 479 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 MTMR8Q96EF0 704 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 TINF2Q9BSI4 451 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 UBA5Q9GZZ9 404 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 LY9Q9HBG7 655 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 A1CFQ9NQ94 594 aaKnown RBP24.96■■□□□ 1.59
PKP3-211ENST00000534401 MAD2L2Q9UI95 211 aa24.96■■□□□ 1.59
PKP3-211ENST00000534401 ERICH2A1L162 156 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 GRM4Q14833 912 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 MUM1L1Q5H9M0 696 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 TMEM67Q5HYA8 995 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 STAG2Q8N3U4 1231 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 FAM133AQ8N9E0 248 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 DDX11Q96FC9 970 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 TMEM87BQ96K49 555 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 MAP3K14Q99558 947 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 CCPG1Q9ULG6 757 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 FRMPD3Q5JV73 1810 aa24.95■■□□□ 1.58
PKP3-211ENST00000534401 LCTP09848 1927 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 PRC1O43663 620 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 ALAS1P13196 640 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 LIFRP42702 1097 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 MNX1P50219 401 aaPredicted RBP24.94■■□□□ 1.58
PKP3-211ENST00000534401 EXOSC10Q01780 885 aaKnown RBP24.94■■□□□ 1.58
PKP3-211ENST00000534401 ADGRF4Q8IZF3 695 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 ANKRD35Q8N283 1001 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 TMTC2Q8N394 836 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 ANKLE1Q8NAG6 615 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 MAF1Q9H063 256 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 CPVLQ9H3G5 476 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 MYH6P13533 1939 aa24.94■■□□□ 1.58
PKP3-211ENST00000534401 SYNGAP1Q96PV0 1343 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 MCM3APO60318 1980 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 BAZ2BQ9UIF8 2168 aaKnown RBP24.93■■□□□ 1.58
PKP3-211ENST00000534401 SH2B2O14492 632 aaPredicted RBP24.93■■□□□ 1.58
PKP3-211ENST00000534401 HSPA4P34932 840 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 SLC4A3P48751 1232 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 SLC35G1Q2M3R5 365 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 CLEC4DQ8WXI8 215 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 JMJD4Q9H9V9 463 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 GPHNQ9NQX3 736 aaPredicted RBP24.93■■□□□ 1.58
PKP3-211ENST00000534401 HOMER2Q9NSB8 354 aa24.93■■□□□ 1.58
PKP3-211ENST00000534401 PFASO15067 1338 aa24.92■■□□□ 1.58
PKP3-211ENST00000534401 KLRF2D3W0D1 207 aa24.92■■□□□ 1.58
PKP3-211ENST00000534401 TFRCP02786 760 aaKnown RBP24.92■■□□□ 1.58
PKP3-211ENST00000534401 RIOX1Q9H6W3 641 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms