RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 MICAL1Q8TDZ2 1067 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 SPATA9Q9BWV2 254 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 SYNJ2O15056 1496 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 SMARCA2P51531 1590 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 B2RBV5 119 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 ZNF205O95201 554 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 HSD3B2P26439 372 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-210ENST00000534172 FGD4Q96M96 766 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 NOL6Q9H6R4 1146 aaKnown RBP4.94□□□□□ -1.62
CSMD3-210ENST00000534172 CGGBP1Q9UFW8 167 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-210ENST00000534172 ZMYM5Q9UJ78 669 aa4.94□□□□□ -1.62
CSMD3-210ENST00000534172 SYPP08247 313 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 VAV1P15498 845 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 MRM1Q6IN84 353 aaKnown RBP4.93□□□□□ -1.62
CSMD3-210ENST00000534172 IQCEQ6IPM2 695 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 SLC23A3Q6PIS1 610 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 SPPL2CQ8IUH8 684 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 USHBP1Q8N6Y0 703 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 PPP1R14AQ96A00 147 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 CYP26B1Q9NR63 512 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 FAM86C1Q9NVL1 165 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 NCAPD3P42695 1498 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 NESP48681 1621 aa4.93□□□□□ -1.62
CSMD3-210ENST00000534172 TRAV20A0A0B4J274 112 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 APPP05067 770 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 FUT4P22083 530 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ITGB7P26010 798 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 EGR3Q06889 387 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 SSRP1Q08945 709 aaKnown RBP4.92□□□□□ -1.62
CSMD3-210ENST00000534172 PTPROQ16827 1216 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 RCSD1Q6JBY9 416 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 CYP2R1Q6VVX0 501 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 KSR1Q8IVT5 923 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 SYNPOQ8N3V7 929 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ZNF513Q8N8E2 541 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ZSWIM2Q8NEG5 633 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 PI4K2BQ8TCG2 481 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 AARSD1Q9BTE6 412 aaKnown RBP4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ATP13A1Q9HD20 1204 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 TCFL5Q9UL49 500 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 CLSTN1O94985 981 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 FGFR1P11362 822 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 CHRNEQ04844 493 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ZP2Q05996 745 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 SNW1Q13573 536 aaKnown RBP4.92□□□□□ -1.62
CSMD3-210ENST00000534172 TAF7LQ5H9L4 462 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 ARTNQ5T4W7 220 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 BRF1Q92994 677 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 TNFRSF10DQ9UBN6 386 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 U3KQE9 123 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 MRC2Q9UBG0 1479 aa4.92□□□□□ -1.62
CSMD3-210ENST00000534172 DNAJC25-GNG10A0A024R161 153 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 SCO2A0A1W2PP80 73 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 SHISA3A0PJX4 238 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ESR1P03372 595 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 KIR2DL1P43626 348 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 KIR2DL2P43627 348 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 PPP2R5DQ14738 602 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 EEF1DP3Q658K8 133 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ZNF227Q86WZ6 799 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 OXR1Q8N573 874 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 JMYQ8N9B5 988 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ZDHHC15Q96MV8 337 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 TMX1Q9H3N1 280 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 KDM2BQ8NHM5 1336 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 A0A1W2PQU0 124 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 HYAL3O43820 417 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 RAB11FIP3O75154 756 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ITGAVP06756 1048 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 SCUBE1Q8IWY4 988 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 FAM9AQ8IZU1 332 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ANKS4BQ8N8V4 417 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ZBTB38Q8NAP3 1195 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 RNPC3Q96LT9 517 aaKnown RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 DNAJC7Q99615 494 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 NKX2-4Q9H2Z4 354 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 CARS2Q9HA77 564 aaKnown RBP4.91□□□□□ -1.62
CSMD3-210ENST00000534172 ZFP64Q9NPA5 681 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 PCDHA11Q9Y5I1 949 aa4.91□□□□□ -1.62
CSMD3-210ENST00000534172 hCG_2014768A0A024R1R8 64 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 CCDC85CA6NKD9 419 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 ENPP3O14638 875 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 AURKAO14965 403 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 KCNH1O95259 989 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 SCG5P05408 212 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 CD8BP10966 210 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 IGBP1P78318 339 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 TEKQ02763 1124 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 MAP4K2Q12851 820 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 BNIP3Q12983 259 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 C2orf27AQ580R0 203 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 HLA-DQA1Q5Y7H0 255 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 E4F1Q66K89 784 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-210ENST00000534172 GTF2IRD2BQ6EKJ0 949 aa4.9□□□□□ -1.62
CSMD3-210ENST00000534172 GTF2IRD2Q86UP8 949 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms