RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TBC1D16Q8TBP0 767 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TDRD3Q9H7E2 651 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 PRPF6O94906 941 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 LMNB1P20700 586 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 UBXN1Q04323 297 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 PIH1D3Q9NQM4 214 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 N4BP1O75113 896 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 LIFRP42702 1097 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 CUEDC2Q9H467 287 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 V9GYY5 206 aaPredicted RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 GCNT3O95395 438 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 RGS12O14924 1447 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 GNAT1P11488 350 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 MAATS1Q7Z4T9 603 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 CEP112Q8N8E3 955 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 SLC7A3Q8WY07 619 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 LUC7L2Q9Y383 392 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
AMBRA1-211ENST00000533727 ENTPD3O75355 529 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 GH2P01242 217 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 LONP1P36776 959 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 PTH1RQ03431 593 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CNOT7Q9UIV1 285 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 RASAL2Q9UJF2 1139 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 ZHX2Q9Y6X8 837 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 ITSN1Q15811 1721 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CTAGE15A4D2H0 777 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 TNNC2P02585 160 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CTAGE8P0CG41 777 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 LIG4P49917 911 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 TYRO3Q06418 890 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 DMP1Q13316 513 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 MYSM1Q5VVJ2 828 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 MFSD14CQ5VZR4 134 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CTAGE4Q8IX94 777 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 NOC4LQ9BVI4 516 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 MIS12Q9H081 205 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 UTYO14607 1347 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 M0R2C6 588 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 KRT86O43790 486 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 HSF2BPO75031 334 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 AP3B2Q13367 1082 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 FAM102BQ5T8I3 360 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 AK8Q96MA6 479 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 RPS6KC1Q96S38 1066 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 MCAMP43121 646 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 PAK1Q13153 545 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 RCSD1Q6JBY9 416 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 STRBPQ96SI9 672 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
AMBRA1-211ENST00000533727 KRT5P13647 590 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 POSTNQ15063 836 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 NACA2Q9H009 215 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 POLR2DO15514 142 aaKnown RBP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 BCRP11274 1271 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 RCAN1P53805 252 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 INF2Q27J81 1249 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 GPBP1Q86WP2 473 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 DPEP1P16444 411 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 OTUD6BQ8N6M0 293 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.47□□□□□ -0.41
AMBRA1-211ENST00000533727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.419e-6■□□□□ 11.3
AMBRA1-211ENST00000533727 ABCB11O95342 1321 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms