RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MAIP1Q8WWC4 291 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 ATP6V0A1Q93050 837 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 JPH2Q9BR39 696 aaPredicted RBP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 SERPINB13Q9UIV8 391 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 ABCA5Q8WWZ7 1642 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 RIOK3O14730 519 aaKnown RBP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 CAPN2P17655 700 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 LGSNQ5TDP6 509 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 CCDC89Q8N998 374 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 MASTLQ96GX5 879 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 DHX36Q9H2U1 1008 aaKnown RBP7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 FAM184BQ9ULE4 1060 aa7.04□□□□□ -1.28
UBQLN1-206ENST00000533705 CFAP74Q9C0B2 1584 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 PRAMEF22A3QJZ6 481 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SLC16A2P36021 539 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 NLRP10Q86W26 655 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 CCDC105Q8IYK2 499 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 AFAP1L2Q8N4X5 818 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 U2AF1L4Q8WU68 220 aaKnown RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 MIS12Q9H081 205 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.03□□□□□ -1.281e-6■■□□□ 13.6
UBQLN1-206ENST00000533705 PALLDQ8WX93 1383 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 PFKFB1P16118 471 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 PPP2R5AQ15172 486 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 TYW1BQ6NUM6 668 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 BRINP3Q76B58 766 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 IFT20Q8IY31 132 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 VPS18Q9P253 973 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 DBNLQ9UJU6 430 aaKnown RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 TLR3O15455 904 aaKnown RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ARHGAP6O43182 974 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ZNF75DP51815 510 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ITKQ08881 620 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 LONRF3Q496Y0 759 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 LRCH2Q5VUJ6 765 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 HDXQ7Z353 690 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SRGAP1Q7Z6B7 1085 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 RETREG2Q8NC44 543 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 FAM76AQ8TAV0 307 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 RABGAP1Q9Y3P9 1069 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ANKARQ7Z5J8 1434 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 EBAG9O00559 213 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 BMP3P12645 472 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SLC12A2P55011 1212 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 GRAPQ13588 217 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 KRT81Q14533 505 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 FAM26FQ5R3K3 315 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 GBP6Q6ZN66 633 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 C4orf50Q6ZRC1 276 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 GRAPLQ8TC17 118 aaPredicted RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 GPR101Q96P66 508 aaPredicted RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 SLF1Q9BQI6 1058 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 ZNF577Q9BSK1 485 aa7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 METTL14Q9HCE5 456 aaKnown RBP7.03□□□□□ -1.28
UBQLN1-206ENST00000533705 MTX1Q13505 466 aa7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 AOC3Q16853 763 aa7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 POMGNT1Q8WZA1 660 aa7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 IFIH1Q9BYX4 1025 aaKnown RBP7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 PI4KBQ9UBF8 816 aa7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 FEZ2Q9UHY8 353 aaPredicted RBP7.02□□□□□ -1.28
UBQLN1-206ENST00000533705 ROBO2Q9HCK4 1378 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 SYNJ2BP-COX16A0A087WUM0 186 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 VIMP08670 466 aaKnown RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 HADHQ16836 314 aaKnown RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 INTS8Q75QN2 995 aaKnown RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 ZSWIM6Q9HCJ5 1215 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 COX16Q9P0S2 106 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 MKRN1Q9UHC7 482 aaKnown RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 USP6P35125 1406 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 USP17L8P0C7I0 530 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 KIF11P52732 1056 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 TBC1D10BQ4KMP7 808 aaPredicted RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 ODR4Q5SWX8 454 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 PDZD4Q76G19 769 aaPredicted RBP7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 TIGD1Q96MW7 591 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 USP28Q96RU2 1077 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 PSMB7Q99436 277 aa7.02□□□□□ -1.29
UBQLN1-206ENST00000533705 GOLGA6CA6NDK9 693 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms