RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-225ENST00000533704 PRR12Q9ULL5 1215 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
CAPN1-225ENST00000533704 DIS3Q9Y2L1 958 aaKnown RBP12.3□□□□□ -0.44
CAPN1-225ENST00000533704 DNM1LO00429 736 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 RARBP10826 455 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
CAPN1-225ENST00000533704 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
CAPN1-225ENST00000533704 ESR2Q92731 530 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 LENG1Q96BZ8 264 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-225ENST00000533704 TRERF1Q96PN7 1200 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 ACAD9Q9H845 621 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 LCTP09848 1927 aa12.29□□□□□ -0.44
CAPN1-225ENST00000533704 DNAJC25-GNG10A0A024R161 153 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 B4E1Z4 1266 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 KDM4AO75164 1064 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 PCP11498 1178 aaKnown RBP12.28□□□□□ -0.44
CAPN1-225ENST00000533704 SYDE2Q5VT97 1194 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 DSCC1Q9BVC3 393 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 XPNPEP3Q9NQH7 507 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 TCP11L1Q9NUJ3 509 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 CTNNA3Q9UI47 895 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 ZNF536O15090 1300 aa12.28□□□□□ -0.44
CAPN1-225ENST00000533704 PLA2G6O60733 806 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 SNAI1O95863 264 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-225ENST00000533704 PGK1P00558 417 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 ZNF865P0CJ78 1059 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-225ENST00000533704 AKR1A1P14550 325 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 ADCYAP1R1P41586 468 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 NOVP48745 357 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPN1-225ENST00000533704 RTP1P59025 263 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 LRRC41Q15345 812 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 IQCA1Q86XH1 822 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 IL25Q9H293 177 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.45
CAPN1-225ENST00000533704 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-225ENST00000533704 ATP11BQ9Y2G3 1177 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 SYNGAP1Q96PV0 1343 aa12.27□□□□□ -0.45
CAPN1-225ENST00000533704 GOLGA8HP0CJ92 632 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 PDHBP11177 359 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 MAGEA10P43363 369 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-225ENST00000533704 ZNF543Q08ER8 600 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 MUM1L1Q5H9M0 696 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 MSL3Q8N5Y2 521 aaKnown RBP12.26□□□□□ -0.45
CAPN1-225ENST00000533704 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 TTC14Q96N46 770 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
CAPN1-225ENST00000533704 LRRC37A2A6NM11 1700 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 ICAM1P05362 532 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 CHMLP26374 656 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 MAMDC4Q6UXC1 1216 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 RNF180Q86T96 592 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 CCDC144CPQ8IYA2 1237 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 FGD4Q96M96 766 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 KRT23Q9C075 422 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 RAD50Q92878 1312 aa12.25□□□□□ -0.45
CAPN1-225ENST00000533704 BAZ2BQ9UIF8 2168 aaKnown RBP12.25□□□□□ -0.45
CAPN1-225ENST00000533704 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 SOWAHBA6NEL2 793 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 DHX16O60231 1041 aaKnown RBP12.24□□□□□ -0.45
CAPN1-225ENST00000533704 TNKSO95271 1327 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 LTBP2Q14767 1821 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 FAM133AQ8N9E0 248 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 PNMA1Q8ND90 353 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 GDF15Q99988 308 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-225ENST00000533704 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
CAPN1-225ENST00000533704 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 ABHD16BQ9H3Z7 469 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 ZSWIM5Q9P217 1185 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms