RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 ICAM1P05362 532 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 CTGFP29279 349 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 SLC35G1Q2M3R5 365 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 SNRNP48Q6IEG0 339 aaKnown RBP19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 TMTC3Q6ZXV5 915 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 NBPF11Q86T75 865 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 CCAR1Q8IX12 1150 aaKnown RBP19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 CCDC144CPQ8IYA2 1237 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 CPXCR1Q8N123 301 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 PORCNQ9H237 461 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 MROH8Q9H579 483 aa19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 FAM217BQ9NTX9 383 aaPredicted RBP19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 NAP1L2Q9ULW6 460 aaPredicted RBP19.12■□□□□ 0.65
PACSIN3-210ENST00000533686 CYTH3O43739 400 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 DHX16O60231 1041 aaKnown RBP19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 PLEKHA8P1O95397 391 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 FMNL1O95466 1100 aaPredicted RBP19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 ERCC3P19447 782 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 SNAP25P60880 206 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 CDC37Q16543 378 aaPredicted RBP19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 CCDC174Q6PII3 467 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 SRBD1Q8N5C6 995 aaKnown RBP19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 TRIM47Q96LD4 638 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 ARHGAP39Q9C0H5 1083 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 EFCC1Q9HA90 598 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 VAT1LQ9HCJ6 419 aa19.11■□□□□ 0.65
PACSIN3-210ENST00000533686 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 ZBTB5O15062 677 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 HOXD10P28358 340 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 CDC27P30260 824 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 CAP1Q01518 475 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 GPR142Q7Z601 462 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 PLEKHH3Q7Z736 793 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 NCAPG2Q86XI2 1143 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 COA7Q96BR5 231 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 AGBL1Q96MI9 1066 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 TPCN1Q9ULQ1 816 aa19.1■□□□□ 0.65
PACSIN3-210ENST00000533686 STRNO43815 780 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 PRMT2P55345 433 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 FUT2Q10981 343 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 QRICH1Q2TAL8 776 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 CHST13Q8NET6 341 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 FBXO40Q9UH90 709 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 CCPG1Q9ULG6 757 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 RIPK3Q9Y572 518 aa19.09■□□□□ 0.65
PACSIN3-210ENST00000533686 PNMA6FA0A0J9YX94 578 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 PFKFB2O60825 505 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 TRAF1Q13077 416 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 OTOP1Q7RTM1 612 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 ABRAQ8N0Z2 381 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 RRP36Q96EU6 259 aaKnown RBP19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 PIGSQ96S52 555 aa19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.64
PACSIN3-210ENST00000533686 SLC15A5A6NIM6 579 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 ST18O60284 1047 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 PTPREP23469 700 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 WDR78Q5VTH9 848 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 FBXO11Q86XK2 927 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 CMTR1Q8N1G2 835 aaKnown RBP19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 TRERF1Q96PN7 1200 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 AMNQ9BXJ7 453 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 SLKQ9H2G2 1235 aaPredicted RBP19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 SRRDQ9UH36 339 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 GJD2Q9UKL4 321 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 IVNS1ABPQ9Y6Y0 642 aa19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
PACSIN3-210ENST00000533686 CASP8AP2Q9UKL3 1982 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 ALAS1P13196 640 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 IFNAR1P17181 557 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 CCT2P78371 535 aaKnown RBP19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 GRB14Q14449 540 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 NTRK3Q16288 839 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 PKN2Q16513 984 aaKnown RBP19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 ME3Q16798 604 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 MORN1Q5T089 497 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 CCDC82Q8N4S0 544 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 SOCS4Q8WXH5 440 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 NUDT12Q9BQG2 462 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 MAF1Q9H063 256 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 ACAD9Q9H845 621 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 RNF146Q9NTX7 359 aa19.06■□□□□ 0.64
PACSIN3-210ENST00000533686 ABCB11O95342 1321 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 FCER1AP12319 257 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 SCRN1Q12765 414 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 STK3Q13188 491 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 USP6NLQ92738 828 aa19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 ZSCAN31Q96LW9 406 aaPredicted RBP19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 NCOA5Q9HCD5 579 aaKnown RBP19.05■□□□□ 0.64
PACSIN3-210ENST00000533686 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms