RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.73■□□□□ 0.59
CHMP4A-207ENST00000533523 LCTP09848 1927 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 DNAJC25-GNG10A0A024R161 153 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 DUSP11O75319 330 aaKnown RBP18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 APPP05067 770 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 DNAJB2P25686 324 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 MAMDC4Q6UXC1 1216 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 ANKRD33Q7Z3H0 272 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 KLHDC9Q8NEP7 349 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 CEP95Q96GE4 821 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 FEM1BQ9UK73 627 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 MROH7Q68CQ1 1323 aa18.72■□□□□ 0.59
CHMP4A-207ENST00000533523 IGKV6D-41A0A0C4DH26 115 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 M0R2C6 588 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 ATP2A1O14983 1001 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 PBX2P40425 430 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 IRX5P78411 483 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 HDAC1Q13547 482 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 ACVR2BQ13705 512 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 ZNF467Q7Z7K2 595 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 VTI1AQ96AJ9 217 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 GLT1D1Q96MS3 346 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 TOX2Q96NM4 488 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 SPC25Q9HBM1 224 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 FBXO40Q9UH90 709 aa18.71■□□□□ 0.59
CHMP4A-207ENST00000533523 WDFY4Q6ZS81 3184 aa18.71■□□□□ 0.58
CHMP4A-207ENST00000533523 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 GRXCR1A8MXD5 290 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 ADCY6O43306 1168 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 TTLL1O95922 423 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 GNAT2P19087 354 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 CST5P28325 142 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 PLA2G5P39877 138 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 ADGRE1Q14246 886 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 C16orf59Q7L2K0 433 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 FGD4Q96M96 766 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 MTMR4Q9NYA4 1195 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 TBX21Q9UL17 535 aa18.7■□□□□ 0.58
CHMP4A-207ENST00000533523 A0A0U1RQG5 324 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 TIMP1P01033 207 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 ASGR1P07306 291 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 CCSAPQ6IQ19 270 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 PCSK9Q8NBP7 692 aaKnown RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 GMCL1P1Q8NEA9 526 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 CHST13Q8NET6 341 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 ABHD16BQ9H3Z7 469 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 ELP1O95163 1332 aa18.69■□□□□ 0.58
CHMP4A-207ENST00000533523 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 PPIGQ13427 754 aaKnown RBP eCLIP18.68■□□□□ 0.586e-8■■□□□ 12.9
CHMP4A-207ENST00000533523 SLFN13Q68D06 897 aa18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 NECAB3Q96P71 396 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.68■□□□□ 0.589e-7■■■□□ 14.9
CHMP4A-207ENST00000533523 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 TTC41PQ6P2S7 1318 aa18.68■□□□□ 0.58
CHMP4A-207ENST00000533523 ERC2O15083 957 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 IGHDP01880 384 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 BMP3P12645 472 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 STAT2P52630 851 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 OAZ1P54368 228 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 GJA9P57773 515 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 CNTN2Q02246 1040 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 CCDC174Q6PII3 467 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 TIFAQ96CG3 184 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 NACAP1Q9BZK3 213 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 PPP1R12CQ9BZL4 782 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 ZNF576Q9H609 170 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 ACAD9Q9H845 621 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 SYNPO2Q9UMS6 1093 aa18.67■□□□□ 0.58
CHMP4A-207ENST00000533523 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 PDE4BQ07343 736 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 LRRFIP1Q32MZ4 808 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 MFSD5Q6N075 450 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 CCDC129Q6ZRS4 1044 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 ADAMTS19Q8TE59 1207 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 MKL1Q969V6 931 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 NAPBQ9H115 298 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 RNF146Q9NTX7 359 aa18.66■□□□□ 0.58
CHMP4A-207ENST00000533523 ARVCFO00192 962 aa18.65■□□□□ 0.58
CHMP4A-207ENST00000533523 TLR3O15455 904 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-207ENST00000533523 SLC3A2P08195 630 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms