RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PPP2R5BQ15173 497 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 USH1GQ495M9 461 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 POTEEQ6S8J3 1075 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 NCAPG2Q86XI2 1143 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 CCDC83Q8IWF9 413 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 AGBL1Q96MI9 1066 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 HOMER2Q9NSB8 354 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 FAM217BQ9NTX9 383 aaPredicted RBP20.24■□□□□ 0.83
NXF1-216ENST00000533499 CCPG1Q9ULG6 757 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 ADGRA2Q96PE1 1338 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 GPR25O00155 361 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 CYTH3O43739 400 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 BCRP11274 1271 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 ALAS1P13196 640 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 MCM2P49736 904 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 CCNA1P78396 465 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 FAM110CQ1W6H9 321 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 SLC35G1Q2M3R5 365 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 QRICH1Q2TAL8 776 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 Q3C1V9 767 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 PHKBQ93100 1093 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 SLC26A6Q9BXS9 759 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 SPATC1LQ9H0A9 340 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 RANBP17Q9H2T7 1088 aaKnown RBP20.23■□□□□ 0.83
NXF1-216ENST00000533499 ADAMTS5Q9UNA0 930 aa20.23■□□□□ 0.83
NXF1-216ENST00000533499 SP3Q02447 781 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 KIF22Q14807 665 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 IL27Q8NEV9 243 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 MOV10L1Q9BXT6 1211 aaKnown RBP20.22■□□□□ 0.83
NXF1-216ENST00000533499 TEX13BQ9BXU2 312 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 RIOX1Q9H6W3 641 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
NXF1-216ENST00000533499 MORF4L1Q9UBU8 362 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
NXF1-216ENST00000533499 CNTNAP5Q8WYK1 1306 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
NXF1-216ENST00000533499 ZBTB5O15062 677 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 FOXN1O15353 648 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 CDKL5O76039 1030 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 FBXO11Q86XK2 927 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
NXF1-216ENST00000533499 ZNF214Q9UL59 606 aaPredicted RBP20.21■□□□□ 0.83
NXF1-216ENST00000533499 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 FKTNO75072 461 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 FMNL1O95466 1100 aaPredicted RBP20.2■□□□□ 0.82
NXF1-216ENST00000533499 ICAM1P05362 532 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 SSRP1Q08945 709 aaKnown RBP20.2■□□□□ 0.82
NXF1-216ENST00000533499 HSCBQ8IWL3 235 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 TMX3Q96JJ7 454 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 AMNQ9BXJ7 453 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 PORCNQ9H237 461 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 EFCC1Q9HA90 598 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 NID2Q14112 1375 aa20.2■□□□□ 0.82
NXF1-216ENST00000533499 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 ERCC3P19447 782 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 OAZ1P54368 228 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 RIOX2Q8IUF8 465 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 CD99L2Q8TCZ2 262 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
NXF1-216ENST00000533499 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.822e-6■■■■□ 21.7
NXF1-216ENST00000533499 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 RNF146Q9NTX7 359 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 ZNF536O15090 1300 aa20.19■□□□□ 0.82
NXF1-216ENST00000533499 TNPO2O14787 897 aaKnown RBP20.18■□□□□ 0.82
NXF1-216ENST00000533499 IFNAR1P17181 557 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 PSMC4P43686 418 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 CTCFP49711 727 aaPredicted RBP20.18■□□□□ 0.82
NXF1-216ENST00000533499 FUT2Q10981 343 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 NTRK3Q16288 839 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 COA7Q96BR5 231 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 TRERF1Q96PN7 1200 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
NXF1-216ENST00000533499 SLC25A27O95847 323 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 HSPA8P11142 646 aaKnown RBP20.17■□□□□ 0.82
NXF1-216ENST00000533499 LBX1P52954 281 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 FCGRTP55899 365 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 LACTBP83111 547 aaPredicted RBP20.17■□□□□ 0.82
NXF1-216ENST00000533499 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 ERO1AQ96HE7 468 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
NXF1-216ENST00000533499 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 ATP2A1O14983 1001 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
NXF1-216ENST00000533499 JAK2O60674 1132 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
NXF1-216ENST00000533499 MAPK4P31152 587 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 COPB2P35606 906 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 FOSBP53539 338 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms