RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 HIPK3Q9H422 1215 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 KANSL2Q9H9L4 492 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 C11orf16Q9NQ32 467 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 COG5Q9UP83 839 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 RIPK3Q9Y572 518 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 SLC4A7Q9Y6M7 1214 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 MUC6Q6W4X9 2439 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 ASTN1O14525 1302 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 SMIM22K7EJ46 135 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 CABYRO75952 493 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 CCL23P55773 120 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 C12orf60Q5U649 245 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 SNRNP48Q6IEG0 339 aaKnown RBP9.41□□□□□ -0.9
NXF1-215ENST00000533440 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 RPUSD2Q8IZ73 545 aaKnown RBP9.41□□□□□ -0.9
NXF1-215ENST00000533440 TMEM57Q8N5G2 664 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
NXF1-215ENST00000533440 CLUAP1Q96AJ1 413 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 SLF1Q9BQI6 1058 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 NOC4LQ9BVI4 516 aaKnown RBP9.41□□□□□ -0.9
NXF1-215ENST00000533440 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 WNT8AQ9H1J5 351 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 ATP8A2Q9NTI2 1148 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 MCM3APO60318 1980 aa9.41□□□□□ -0.9
NXF1-215ENST00000533440 LRRC37A2A6NM11 1700 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 RFXAPO00287 272 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 PRKAB2O43741 272 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 GTPBP6O43824 516 aaPredicted RBP9.4□□□□□ -0.9
NXF1-215ENST00000533440 ATP2A2P16615 1042 aaKnown RBP9.4□□□□□ -0.9
NXF1-215ENST00000533440 BEX3Q00994 111 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 ITGA7Q13683 1181 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
NXF1-215ENST00000533440 CXCL17Q6UXB2 119 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 PRPF38AQ8NAV1 312 aaKnown RBP9.4□□□□□ -0.9
NXF1-215ENST00000533440 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
NXF1-215ENST00000533440 ARMT1Q9H993 441 aa9.4□□□□□ -0.9
NXF1-215ENST00000533440 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
NXF1-215ENST00000533440 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.39□□□□□ -0.91
NXF1-215ENST00000533440 EPOPA6NHQ4 379 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 USP17L21D6R901 530 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 B4GALT4O60513 344 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 CA3P07451 260 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 PFKMP08237 780 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 TMEM67Q5HYA8 995 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 AACSQ86V21 672 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 CCDC144CPQ8IYA2 1237 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 ANKRD35Q8N283 1001 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 CHST13Q8NET6 341 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.39□□□□□ -0.91
NXF1-215ENST00000533440 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
NXF1-215ENST00000533440 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
NXF1-215ENST00000533440 TRPV6Q9H1D0 765 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 SLC38A10Q9HBR0 1119 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 FBXO40Q9UH90 709 aa9.39□□□□□ -0.91
NXF1-215ENST00000533440 GREB1LQ9C091 1923 aaPredicted RBP9.39□□□□□ -0.91
NXF1-215ENST00000533440 BAZ2AQ9UIF9 1905 aaKnown RBP9.39□□□□□ -0.91
NXF1-215ENST00000533440 ZBED9Q6R2W3 1325 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 F5H6K3 240 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 PI4K2BG5E9Z4 385 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 RAD21O60216 631 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 ZBED4O75132 1171 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 KLRC3Q07444 240 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 TTLL4Q14679 1199 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
NXF1-215ENST00000533440 KRT40Q6A162 431 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
NXF1-215ENST00000533440 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 CPXCR1Q8N123 301 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 HLA-CQ95604 372 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 SCLYQ96I15 445 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 RAVER2Q9HCJ3 691 aaKnown RBP9.38□□□□□ -0.91
NXF1-215ENST00000533440 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
NXF1-215ENST00000533440 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 GOLIM4O00461 696 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 ZEB2O60315 1214 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 MBD4O95243 580 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 NDUFB10O96000 172 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 ADD2P35612 726 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 OAZ1P54368 228 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 CNTN2Q02246 1040 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 TAP1Q03518 808 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
NXF1-215ENST00000533440 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 CTR9Q6PD62 1173 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 TLK2Q86UE8 772 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 PHOSPHO2Q8TCD6 241 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 ALDH8A1Q9H2A2 487 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms