RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 JPH3Q8WXH2 748 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 GTF3C6Q969F1 213 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SIL1Q9H173 461 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CHCHD3Q9NX63 227 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 LTBP3Q9NS15 1303 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CCDC85CA6NKD9 419 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 RPN1P04843 607 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 MYL3P08590 195 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 DPEP1P16444 411 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 EPB42P16452 691 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 HOXA10P31260 410 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 ME1P48163 572 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SNW1Q13573 536 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 ARID5BQ14865 1188 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 ELF2Q15723 593 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 GPR162Q16538 588 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SYT10Q6XYQ8 523 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 Q6ZUG5 572 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CCAR2Q8N163 923 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TTLL6Q8N841 843 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 ZBTB38Q8NAP3 1195 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 APPL2Q8NEU8 664 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 EAF2Q96CJ1 260 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 RBM17Q96I25 401 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TACO1Q9BSH4 297 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TRIM6Q9C030 488 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 KCND1Q9NSA2 647 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 LUZP4Q9P127 313 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SBF1O95248 1867 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 RTL9Q8NET4 1388 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 A0A1B0GUL7 405 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SMC2O95347 1197 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 PCCAP05165 728 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 KCNA3P22001 575 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 FANCCQ00597 558 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 PPP2R5CQ13362 524 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TMEM95Q3KNT9 176 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SUSD4Q5VX71 490 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CCSAPQ6IQ19 270 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 UNC5DQ6UXZ4 953 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CCDC91Q7Z6B0 441 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 HOMER1Q86YM7 354 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 FSIP1Q8NA03 581 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 LSM14AQ8ND56 463 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 GPR101Q96P66 508 aaPredicted RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 CRAMP1Q96RY5 1269 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 NOL10Q9BSC4 688 aaKnown RBP6.1□□□□□ -1.43
CKAP5-212ENST00000533413 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 TMX1Q9H3N1 280 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 COMMD8Q9NX08 183 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 SUFUQ9UMX1 484 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 FHOD1Q9Y613 1164 aa6.1□□□□□ -1.43
CKAP5-212ENST00000533413 USP27XA6NNY8 438 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 GRM8O00222 908 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 TSPAN6O43657 245 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 C21orf2O43822 256 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 TPPPO94811 219 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 SCGB1D2O95969 90 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 ENPP1P22413 925 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 ZNF211Q13398 564 aaPredicted RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 ATL3Q6DD88 541 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 AOPEPQ8N6M6 819 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 TEX19Q8NA77 164 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 CCDC150Q8NCX0 1101 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 LINS1Q8NG48 757 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 FRS2Q8WU20 508 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 RPGRQ92834 1020 aaKnown RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 PAWRQ96IZ0 340 aaKnown RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 NLRP3Q96P20 1036 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 LLPHQ9BRT6 129 aaKnown RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 RIC8AQ9NPQ8 531 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 ARGLU1Q9NWB6 273 aaPredicted RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 RCOR1Q9UKL0 485 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 N6AMT1Q9Y5N5 214 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 PPP2R3BQ9Y5P8 575 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 MAGED1Q9Y5V3 778 aaPredicted RBP6.09□□□□□ -1.43
CKAP5-212ENST00000533413 ABCC12Q96J65 1359 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 SLX4Q8IY92 1834 aa6.09□□□□□ -1.43
CKAP5-212ENST00000533413 FAM221BA6H8Z2 402 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 CCP110O43303 1012 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 TAF5LO75529 589 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 RGS20O76081 388 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 TUBB4AP04350 444 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 SFPQP23246 707 aaKnown RBP eCLIP6.09□□□□□ -1.44
CKAP5-212ENST00000533413 MAGEA9P43362 315 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 TNNT3P45378 269 aaPredicted RBP6.09□□□□□ -1.44
CKAP5-212ENST00000533413 INF2Q27J81 1249 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 CWF19L2Q2TBE0 894 aaKnown RBP6.09□□□□□ -1.44
CKAP5-212ENST00000533413 ERFEQ4G0M1 354 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 NAA16Q6N069 864 aaPredicted RBP6.09□□□□□ -1.44
CKAP5-212ENST00000533413 SAMD3Q8N6K7 520 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 ARL10Q8N8L6 244 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 MYD88Q99836 296 aa6.09□□□□□ -1.44
CKAP5-212ENST00000533413 EIF2AK1Q9BQI3 630 aaKnown RBP6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms