RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 KLRC4O43908 158 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 GYPCP04921 128 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 CASP14P31944 242 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 UBA7P41226 1012 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 RAD9BQ6WBX8 426 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 SLF2Q8IX21 1173 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 CCSER1Q9C0I3 900 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
CACNA1E-208ENST00000533229 TRIM49BA6NDI0 452 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 CCNT1O60563 726 aaKnown RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 GABPAQ06546 454 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 RASSF8Q8NHQ8 419 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 VPS16Q9H269 839 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 MRPL44Q9H9J2 332 aaKnown RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 KBTBD4Q9NVX7 518 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 A0A0U1RQJ8 604 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 RNF225M0QZC1 329 aaPredicted RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 LAD1O00515 517 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 MFAP3LO75121 409 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 PDHBP11177 359 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 PRPHP41219 470 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 FILIP1LQ4L180 1135 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 TCP11X2Q5H9J9 407 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 ADSSL1Q8N142 457 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 ATRIPQ8WXE1 791 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 BIN2Q9UBW5 565 aaPredicted RBP17.3■□□□□ 0.36
CACNA1E-208ENST00000533229 N4BP3O15049 544 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 AKR1B1P15121 316 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 NONOQ15233 471 aaKnown RBP eCLIP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 TAB2Q9NYJ8 693 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 KCNJ18B7U540 433 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 URI1O94763 535 aaPredicted RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 GNA11P29992 359 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 HSPA1LP34931 641 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 KCNJ12Q14500 433 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 LRRC47Q8N1G4 583 aaKnown RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 ATP6V0A2Q9Y487 856 aa17.29■□□□□ 0.36
CACNA1E-208ENST00000533229 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 PLCG1P19174 1290 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 GNG11P61952 73 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 CDK5RAP2Q96SN8 1893 aa17.28■□□□□ 0.36
CACNA1E-208ENST00000533229 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 EDIL3O43854 480 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 KCNB1Q14721 858 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 CABP7Q86V35 215 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 ZNF397Q8NF99 534 aaPredicted RBP17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 COA7Q96BR5 231 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 COA1Q9GZY4 146 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.36
CACNA1E-208ENST00000533229 GOLGA6L9A6NEM1 432 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 RHOBTB3O94955 611 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 TECP42680 631 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 DOK7Q18PE1 504 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 SOGA3Q5TF21 947 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 KIFC2Q96AC6 838 aa17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 MMTAG2Q9BU76 263 aaKnown RBP17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.35
CACNA1E-208ENST00000533229 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 SRGNP10124 158 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 SCNN1DP51172 638 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 FEZ1Q99689 392 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 H7C1D1 291 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 CCDC175P0C221 793 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 SNHG28P0DPA3 235 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 SPAG1Q07617 926 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms