RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 RFXAPO00287 272 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 GABPAQ06546 454 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
TRAPPC4-213ENST00000533149 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 CABYRO75952 493 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 CA3P07451 260 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 PFKMP08237 780 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZAP70P43403 619 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 ACVR2BQ13705 512 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
TRAPPC4-213ENST00000533149 CHD9Q3L8U1 2897 aa13.52□□□□□ -0.24
TRAPPC4-213ENST00000533149 VWA5AO00534 786 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 ALADP13716 330 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 CCL23P55773 120 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 NKX3-2P78367 333 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 NHLH1Q02575 133 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 CCDC144BQ3MJ40 725 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 UIMC1Q96RL1 719 aa13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-213ENST00000533149 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 IRX5P78411 483 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 ICA1Q05084 483 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 TNNI3KQ59H18 835 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 DBNDD2Q9BQY9 259 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 ZNF214Q9UL59 606 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 FPGT-TNNI3KV9GXZ4 949 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-213ENST00000533149 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 KIF28PB7ZC32 967 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 ACTN1P12814 892 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 KRT40Q6A162 431 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 SIAH1Q8IUQ4 282 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 GJD3Q8N144 294 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 PHOSPHO2Q8TCD6 241 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 ARNTL2Q8WYA1 636 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 TEX13BQ9BXU2 312 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 WNT8AQ9H1J5 351 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
TRAPPC4-213ENST00000533149 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 CTAGE5O15320 804 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 ADCY6O43306 1168 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 CXCL17Q6UXB2 119 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 FBXO28Q9NVF7 368 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
TRAPPC4-213ENST00000533149 ZEB2O60315 1214 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 PDE1AP54750 535 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 TAP1Q03518 808 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 GRB10Q13322 594 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 TTLL4Q14679 1199 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 AACSQ86V21 672 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 EAF2Q96CJ1 260 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
TRAPPC4-213ENST00000533149 CHD7Q9P2D1 2997 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 MYO5AQ9Y4I1 1855 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 PARP14Q460N5 1801 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 B4GALT4O60513 344 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 BEX3Q00994 111 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-213ENST00000533149 ARMCX2Q7L311 632 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms