RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC174Q6PII3 467 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 GPCPD1Q9NPB8 672 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 ZSWIM5Q9P217 1185 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 NR2E3Q9Y5X4 410 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 EVI5O60447 810 aa35.59■■■■□ 3.29
SSSCA1-207ENST00000533115 SLC16A2P36021 539 aa35.59■■■■□ 3.29
SSSCA1-207ENST00000533115 TKFCQ3LXA3 575 aa35.59■■■■□ 3.29
SSSCA1-207ENST00000533115 ZSCAN10Q96SZ4 725 aaPredicted RBP35.59■■■■□ 3.29
SSSCA1-207ENST00000533115 ACAD9Q9H845 621 aa35.59■■■■□ 3.29
SSSCA1-207ENST00000533115 SNHG28P0DPA3 235 aa35.58■■■■□ 3.29
SSSCA1-207ENST00000533115 SYDE2Q5VT97 1194 aa35.58■■■■□ 3.29
SSSCA1-207ENST00000533115 MSL3Q8N5Y2 521 aaKnown RBP35.58■■■■□ 3.29
SSSCA1-207ENST00000533115 ANKS1AQ92625 1134 aa35.58■■■■□ 3.29
SSSCA1-207ENST00000533115 RNF146Q9NTX7 359 aa35.58■■■■□ 3.29
SSSCA1-207ENST00000533115 COL6A1P12109 1028 aa35.57■■■■□ 3.28
SSSCA1-207ENST00000533115 ZNF543Q08ER8 600 aa35.57■■■■□ 3.28
SSSCA1-207ENST00000533115 RANBP17Q9H2T7 1088 aaKnown RBP35.57■■■■□ 3.28
SSSCA1-207ENST00000533115 PFASO15067 1338 aa35.57■■■■□ 3.28
SSSCA1-207ENST00000533115 ALAS1P13196 640 aa35.56■■■■□ 3.28
SSSCA1-207ENST00000533115 TRERF1Q96PN7 1200 aa35.56■■■■□ 3.28
SSSCA1-207ENST00000533115 U3KPZ7 1027 aaPredicted RBP35.56■■■■□ 3.28
SSSCA1-207ENST00000533115 MAMDC4Q6UXC1 1216 aa35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 ZNF467Q7Z7K2 595 aaPredicted RBP35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 ENAHQ8N8S7 591 aaPredicted RBP35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 PNMA1Q8ND90 353 aa35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 KAT14Q9H8E8 782 aa35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 ALPK3Q96L96 1907 aa35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 SYNGAP1Q96PV0 1343 aa35.55■■■■□ 3.28
SSSCA1-207ENST00000533115 ICAM1P05362 532 aa35.54■■■■□ 3.28
SSSCA1-207ENST00000533115 ANO1Q5XXA6 986 aa35.54■■■■□ 3.28
SSSCA1-207ENST00000533115 CCPG1Q9ULG6 757 aa35.54■■■■□ 3.28
SSSCA1-207ENST00000533115 CNPY2Q9Y2B0 182 aa35.54■■■■□ 3.28
SSSCA1-207ENST00000533115 TNKSO95271 1327 aa35.54■■■■□ 3.28
SSSCA1-207ENST00000533115 CYP21A2P08686 494 aa35.53■■■■□ 3.28
SSSCA1-207ENST00000533115 TAL1P17542 331 aaPredicted RBP35.53■■■■□ 3.28
SSSCA1-207ENST00000533115 UBAC1Q9BSL1 405 aa35.53■■■■□ 3.28
SSSCA1-207ENST00000533115 A1CFQ9NQ94 594 aaKnown RBP35.53■■■■□ 3.28
SSSCA1-207ENST00000533115 DNM1LO00429 736 aa35.52■■■■□ 3.28
SSSCA1-207ENST00000533115 GPATCH4Q5T3I0 446 aaKnown RBP35.52■■■■□ 3.28
SSSCA1-207ENST00000533115 SKAP1Q86WV1 359 aa35.52■■■■□ 3.28
SSSCA1-207ENST00000533115 ARRDC4Q8NCT1 418 aa35.52■■■■□ 3.28
SSSCA1-207ENST00000533115 FGD4Q96M96 766 aa35.52■■■■□ 3.28
SSSCA1-207ENST00000533115 SNAI1O95863 264 aaPredicted RBP35.51■■■■□ 3.28
SSSCA1-207ENST00000533115 ZNF865P0CJ78 1059 aaPredicted RBP35.51■■■■□ 3.28
SSSCA1-207ENST00000533115 TRDNQ13061 729 aa35.51■■■■□ 3.28
SSSCA1-207ENST00000533115 POTEB2H3BUK9 544 aa35.5■■■■□ 3.27
SSSCA1-207ENST00000533115 MUM1L1Q5H9M0 696 aa35.5■■■■□ 3.27
SSSCA1-207ENST00000533115 MAP4K1Q92918 833 aa35.5■■■■□ 3.27
SSSCA1-207ENST00000533115 GOLGA8HP0CJ92 632 aa35.49■■■■□ 3.27
SSSCA1-207ENST00000533115 CNTN2Q02246 1040 aa35.49■■■■□ 3.27
SSSCA1-207ENST00000533115 GJC2Q5T442 439 aaPredicted RBP35.49■■■■□ 3.27
SSSCA1-207ENST00000533115 CYB5R4Q7L1T6 521 aa35.49■■■■□ 3.27
SSSCA1-207ENST00000533115 FAM133AQ8N9E0 248 aa35.49■■■■□ 3.27
SSSCA1-207ENST00000533115 AKR1A1P14550 325 aa35.48■■■■□ 3.27
SSSCA1-207ENST00000533115 SENP6Q9GZR1 1112 aaPredicted RBP35.48■■■■□ 3.27
SSSCA1-207ENST00000533115 SMCHD1A6NHR9 2005 aa35.48■■■■□ 3.27
SSSCA1-207ENST00000533115 RARBP10826 455 aa35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 BMP2KLQ5H9B9 411 aa35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 IFIT1BQ5T764 474 aaKnown RBP35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 C7orf61Q8IZ16 206 aa35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 CDKN2AIPQ9NXV6 580 aaPredicted RBP35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 COLQQ9Y215 455 aaPredicted RBP35.47■■■■□ 3.27
SSSCA1-207ENST00000533115 KIAA1211Q6ZU35 1233 aa35.46■■■■□ 3.27
SSSCA1-207ENST00000533115 CYP39A1Q9NYL5 469 aa35.46■■■■□ 3.27
SSSCA1-207ENST00000533115 PNMA2Q9UL42 364 aa35.46■■■■□ 3.27
SSSCA1-207ENST00000533115 RBM8AQ9Y5S9 174 aaKnown RBP35.46■■■■□ 3.27
SSSCA1-207ENST00000533115 TAF6LQ9Y6J9 622 aa35.46■■■■□ 3.27
SSSCA1-207ENST00000533115 KBTBD13C9JR72 458 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 E7EWF7 191 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 SEC23AQ15436 765 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 ASPRV1Q53RT3 343 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 ARMCX2Q7L311 632 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 ESYT1Q9BSJ8 1104 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 UBA5Q9GZZ9 404 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 XPNPEP3Q9NQH7 507 aa35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 ZHX1Q9UKY1 873 aaPredicted RBP35.45■■■■□ 3.27
SSSCA1-207ENST00000533115 SOWAHBA6NEL2 793 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 MYCNP04198 464 aaPredicted RBP35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 ACVR2BQ13705 512 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 LRRC41Q15345 812 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 LRRC26Q2I0M4 334 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 HABP4Q5JVS0 413 aaKnown RBP35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 CHRDL2Q6WN34 429 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 NSMFQ6X4W1 530 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 RALYLQ86SE5 291 aaKnown RBP35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 CCDC144CPQ8IYA2 1237 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 CCDC136Q96JN2 1154 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 ABHD16BQ9H3Z7 469 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 FAM184BQ9ULE4 1060 aa35.44■■■■□ 3.26
SSSCA1-207ENST00000533115 NCOA7Q8NI08 942 aa35.43■■■■□ 3.26
SSSCA1-207ENST00000533115 CPVLQ9H3G5 476 aa35.43■■■■□ 3.26
SSSCA1-207ENST00000533115 WDR19Q8NEZ3 1342 aa35.42■■■■□ 3.26
SSSCA1-207ENST00000533115 PARP1P09874 1014 aaKnown RBP35.42■■■■□ 3.26
SSSCA1-207ENST00000533115 STOX1Q6ZVD7 989 aa35.42■■■■□ 3.26
SSSCA1-207ENST00000533115 LSG1Q9H089 658 aaKnown RBP35.42■■■■□ 3.26
SSSCA1-207ENST00000533115 MCM3APO60318 1980 aa35.42■■■■□ 3.26
SSSCA1-207ENST00000533115 LENG1Q96BZ8 264 aaPredicted RBP35.41■■■■□ 3.26
SSSCA1-207ENST00000533115 ASB14A6NK59 587 aa35.4■■■■□ 3.26
SSSCA1-207ENST00000533115 NFIBO00712 420 aa35.4■■■■□ 3.26
SSSCA1-207ENST00000533115 PGK1P00558 417 aa35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms