RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ANKS1AQ92625 1134 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 ZSCAN10Q96SZ4 725 aaPredicted RBP19.55■□□□□ 0.72
PKP3-209ENST00000533069 ZKSCAN3Q9BRR0 538 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
PKP3-209ENST00000533069 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 AGBL1Q96MI9 1066 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 UBAC1Q9BSL1 405 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 RANBP17Q9H2T7 1088 aaKnown RBP19.54■□□□□ 0.72
PKP3-209ENST00000533069 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 HOMER2Q9NSB8 354 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 RNF146Q9NTX7 359 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
PKP3-209ENST00000533069 SYNGAP1Q96PV0 1343 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 ICAM1P05362 532 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 PTH1RQ03431 593 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 ZNF543Q08ER8 600 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 TRDNQ13061 729 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 PNMA1Q8ND90 353 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 ZSWIM5Q9P217 1185 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 CNPY2Q9Y2B0 182 aa19.53■□□□□ 0.72
PKP3-209ENST00000533069 PFASO15067 1338 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 TNKSO95271 1327 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 FRMPD2Q68DX3 1309 aaPredicted RBP19.52■□□□□ 0.72
PKP3-209ENST00000533069 H0YGN5 161 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 EVI5O60447 810 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 COL6A1P12109 1028 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 SLC16A2P36021 539 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 BMP2KLQ5H9B9 411 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 MAMDC4Q6UXC1 1216 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 ENAHQ8N8S7 591 aaPredicted RBP19.52■□□□□ 0.72
PKP3-209ENST00000533069 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 CCPG1Q9ULG6 757 aa19.52■□□□□ 0.72
PKP3-209ENST00000533069 DNM1LO00429 736 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 CYP21A2P08686 494 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 ALAS1P13196 640 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 KIAA1211Q6ZU35 1233 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 ARRDC4Q8NCT1 418 aa19.51■□□□□ 0.71
PKP3-209ENST00000533069 A1CFQ9NQ94 594 aaKnown RBP19.51■□□□□ 0.71
PKP3-209ENST00000533069 SNAP25P60880 206 aa19.5■□□□□ 0.71
PKP3-209ENST00000533069 MAP4K1Q92918 833 aa19.5■□□□□ 0.71
PKP3-209ENST00000533069 POTEB2H3BUK9 544 aa19.49■□□□□ 0.71
PKP3-209ENST00000533069 AKR1A1P14550 325 aa19.49■□□□□ 0.71
PKP3-209ENST00000533069 ASPRV1Q53RT3 343 aa19.49■□□□□ 0.71
PKP3-209ENST00000533069 IFIT1BQ5T764 474 aaKnown RBP19.49■□□□□ 0.71
PKP3-209ENST00000533069 RALYLQ86SE5 291 aaKnown RBP19.49■□□□□ 0.71
PKP3-209ENST00000533069 FAM133AQ8N9E0 248 aa19.49■□□□□ 0.71
PKP3-209ENST00000533069 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
PKP3-209ENST00000533069 ZNF865P0CJ78 1059 aaPredicted RBP19.48■□□□□ 0.71
PKP3-209ENST00000533069 RARBP10826 455 aa19.48■□□□□ 0.71
PKP3-209ENST00000533069 FGD4Q96M96 766 aa19.48■□□□□ 0.71
PKP3-209ENST00000533069 ESYT1Q9BSJ8 1104 aa19.48■□□□□ 0.71
PKP3-209ENST00000533069 KBTBD13C9JR72 458 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 E7EWF7 191 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 SNAI1O95863 264 aaPredicted RBP19.47■□□□□ 0.71
PKP3-209ENST00000533069 GOLGA8HP0CJ92 632 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 TAL1P17542 331 aaPredicted RBP19.47■□□□□ 0.71
PKP3-209ENST00000533069 SEC23AQ15436 765 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 MUM1L1Q5H9M0 696 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 CYB5R4Q7L1T6 521 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 NCOA7Q8NI08 942 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 ABHD16BQ9H3Z7 469 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.47■□□□□ 0.71
PKP3-209ENST00000533069 CYP39A1Q9NYL5 469 aa19.47■□□□□ 0.71
PKP3-209ENST00000533069 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
PKP3-209ENST00000533069 ERICH2A1L162 156 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 ASB14A6NK59 587 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 PARP1P09874 1014 aaKnown RBP19.46■□□□□ 0.71
PKP3-209ENST00000533069 CNTN2Q02246 1040 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 SART3Q15020 963 aaKnown RBP19.46■□□□□ 0.71
PKP3-209ENST00000533069 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 NSMFQ6X4W1 530 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 ARMCX2Q7L311 632 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 SENP6Q9GZR1 1112 aaPredicted RBP19.46■□□□□ 0.71
PKP3-209ENST00000533069 XPNPEP3Q9NQH7 507 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 ZHX1Q9UKY1 873 aaPredicted RBP19.46■□□□□ 0.71
PKP3-209ENST00000533069 FAM184BQ9ULE4 1060 aa19.46■□□□□ 0.71
PKP3-209ENST00000533069 ACVR2BQ13705 512 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 GJC2Q5T442 439 aaPredicted RBP19.45■□□□□ 0.7
PKP3-209ENST00000533069 CASC1Q6TDU7 716 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 RNF180Q86T96 592 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 C7orf61Q8IZ16 206 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 LSG1Q9H089 658 aaKnown RBP19.45■□□□□ 0.7
PKP3-209ENST00000533069 FRMPD3Q5JV73 1810 aa19.45■□□□□ 0.7
PKP3-209ENST00000533069 SOWAHBA6NEL2 793 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 IFIT3O14879 490 aaKnown RBP19.44■□□□□ 0.7
PKP3-209ENST00000533069 LRRC41Q15345 812 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 SKAP1Q86WV1 359 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 UBA5Q9GZZ9 404 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 MAF1Q9H063 256 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 ADD3Q9UEY8 706 aaKnown RBP19.44■□□□□ 0.7
PKP3-209ENST00000533069 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
PKP3-209ENST00000533069 PLXNA1Q9UIW2 1896 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 LOC102724159A0A0B4J2E5 919 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 NFIBO00712 420 aa19.43■□□□□ 0.7
PKP3-209ENST00000533069 PWP2Q15269 919 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms