RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 ZNF296Q8WUU4 475 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-217ENST00000532877 PIBF1Q8WXW3 757 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 MTMR8Q96EF0 704 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 ORC3Q9UBD5 711 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-217ENST00000532877 PPP1R9AQ9ULJ8 1098 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 A0A0G2JMZ2 1700 aa16.56■□□□□ 0.24
COL16A1-217ENST00000532877 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
COL16A1-217ENST00000532877 PRPF38AQ8NAV1 312 aaKnown RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 PIGSQ96S52 555 aa16.55■□□□□ 0.24
COL16A1-217ENST00000532877 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-217ENST00000532877 COL11A1P12107 1806 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 TESPA1A2RU30 521 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 BTBD19C9JJ37 291 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 DEXIO95424 95 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 IRX3P78415 501 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 PABPC4Q13310 644 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 PKN1Q16512 942 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 CFHR5Q9BXR6 569 aa16.54■□□□□ 0.24
COL16A1-217ENST00000532877 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
COL16A1-217ENST00000532877 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-217ENST00000532877 ZBTB5O15062 677 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 DSG3P32926 999 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 SNAP25P60880 206 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 COG2Q14746 738 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-217ENST00000532877 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 FAM184AQ8NB25 1140 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 PTPN18Q99952 460 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-217ENST00000532877 RANBP17Q9H2T7 1088 aaKnown RBP16.53■□□□□ 0.24
COL16A1-217ENST00000532877 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
COL16A1-217ENST00000532877 PNMA6FA0A0J9YX94 578 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 PDHXO00330 501 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 PPP1R11O60927 126 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-217ENST00000532877 SCG2P13521 617 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 TM4SF4P48230 202 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 FBXO46Q6PJ61 603 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-217ENST00000532877 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 WASF1Q92558 559 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 SLC38A10Q9HBR0 1119 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
COL16A1-217ENST00000532877 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL16A1-217ENST00000532877 VWA5AO00534 786 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 OSBPP22059 807 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 HERVK_113P62684 666 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 SREBF2Q12772 1141 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
COL16A1-217ENST00000532877 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
COL16A1-217ENST00000532877 HOXC10Q9NYD6 342 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
COL16A1-217ENST00000532877 GPR25O00155 361 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 TBC1D8O95759 1140 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 FDX1P10109 184 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 FOSBP53539 338 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 INHBEP58166 350 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 SHISA4Q96DD7 197 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
COL16A1-217ENST00000532877 SMCHD1A6NHR9 2005 aa16.5■□□□□ 0.23
COL16A1-217ENST00000532877 ZNF536O15090 1300 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 STXBP3O00186 592 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 ZBED4O75132 1171 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 CYP2C8P10632 490 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-217ENST00000532877 PDCP20941 246 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 DDIT3P35638 169 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 IFNL1Q8IU54 200 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-217ENST00000532877 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
COL16A1-217ENST00000532877 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
COL16A1-217ENST00000532877 GJB4Q9NTQ9 266 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 BARHL2Q9NY43 387 aa16.49■□□□□ 0.23
COL16A1-217ENST00000532877 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms