RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	KLRC3	Q07444	240 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PRAMEF19	Q5SWL8	479 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TSHZ3	Q63HK5	1081 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SNRNP48	Q6IEG0	339 aa	Known RBP	11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SLC39A5	Q6ZMH5	540 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PRPF38A	Q8NAV1	312 aa	Known RBP	11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TINF2	Q9BSI4	451 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	NAPB	Q9H115	298 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	XPNPEP3	Q9NQH7	507 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CLIP2	Q9UDT6	1046 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ADAMTS5	Q9UNA0	930 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TTLL1	O95922	423 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	IK	Q13123	557 aa	Predicted RBP	11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	LRRC41	Q15345	812 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	FAM47A	Q5JRC9	791 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PPP4R3B	Q5MIZ7	849 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CPXCR1	Q8N123	301 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	OSBP2	Q969R2	916 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	FERMT2	Q96AC1	680 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	KIFC2	Q96AC6	838 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	KCNK17	Q96T54	332 aa		11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	NUP88	Q99567	741 aa	Predicted RBP	11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ZNF214	Q9UL59	606 aa	Predicted RBP	11.46	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PATL2	C9JE40	543 aa	Known RBP	11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793		M0R2C6	588 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PRDM1	O75626	825 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	NDUFB10	O96000	172 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ADCYAP1R1	P41586	468 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TRIM60	Q495X7	471 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	IFNL3	Q8IZI9	196 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MSL3	Q8N5Y2	521 aa	Known RBP	11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MFRP	Q9BY79	579 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FBXO40	Q9UH90	709 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FEM1B	Q9UK73	627 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SYNPO2	Q9UMS6	1093 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MCM3AP	O60318	1980 aa		11.45	□□□□□ -0.58
PPFIA1-223	ENST00000532793	IGHA2	P01877	340 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MX1	P20591	662 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ZNF792	Q3KQV3	632 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	LRRC47	Q8N1G4	583 aa	Known RBP	11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ANKRD35	Q8N283	1001 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	NUP133	Q8WUM0	1156 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	CEP95	Q96GE4	821 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SPC25	Q9HBM1	224 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FAM184B	Q9ULE4	1060 aa		11.44	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SYNGAP1	Q96PV0	1343 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TSPY2	A6NKD2	308 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PGK1	P00558	417 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FDX1	P10109	184 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	STAT2	P52630	851 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	OAZ1	P54368	228 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PPARA	Q07869	468 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ZNF697	Q5TEC3	545 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SLFN13	Q68D06	897 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793		Q7L0L9	218 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	GMCL1P1	Q8NEA9	526 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	CHST13	Q8NET6	341 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	REPS2	Q8NFH8	660 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	RAVER2	Q9HCJ3	691 aa	Known RBP	11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MTMR4	Q9NYA4	1195 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PHF24	Q9UPV7	400 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	STXBP5L	Q9Y2K9	1186 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TACC3	Q9Y6A5	838 aa		11.43	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PLIN4	Q96Q06	1357 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ATP2A1	O14983	1001 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	CLTB	P09497	229 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	BMP3	P12645	472 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	RAG1	P15918	1043 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SLC1A4	P43007	532 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TFAP4	Q01664	338 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SNX17	Q15036	470 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	C1orf53	Q5VUE5	145 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FAM160B2	Q86V87	743 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	NEDD1	Q8NHV4	660 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	CHURC1	Q8WUH1	139 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PTCD2	Q8WV60	388 aa	Known RBP	11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	BAD	Q92934	168 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MKL1	Q969V6	931 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	STARD7	Q9NQZ5	370 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TOMM22	Q9NS69	142 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	HOMER2	Q9NSB8	354 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	STX8	Q9UNK0	236 aa		11.42	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MROH7	Q68CQ1	1323 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	IGKV6D-41	A0A0C4DH26	115 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793		A0A1W2PQ45	241 aa	Predicted RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793		A0A1W2PQY0	241 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MOXD2P	A6NHM9	499 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	DCDC2C	A8MYV0	355 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TMEM232	C9JQI7	657 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PQBP1	O60828	265 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	C6orf222	P0C671	652 aa	Predicted RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ZMYM1	Q5SVZ6	1142 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ANKRD45	Q5TZF3	282 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PCSK9	Q8NBP7	692 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PI4K2B	Q8TCG2	481 aa		11.41	□□□□□ -0.58

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