RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SLC4A3P48751 1232 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 PRMT2P55345 433 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 SLC35G1Q2M3R5 365 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 ADGRF4Q8IZF3 695 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 FBXL16Q8N461 479 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 BRF1Q92994 677 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 AGBL1Q96MI9 1066 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 AGXT2Q9BYV1 514 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 CWC22Q9HCG8 908 aaKnown RBP28.92■■■□□ 2.22
USP48-214ENST00000532737 COL11A1P12107 1806 aaPredicted RBP28.92■■■□□ 2.22
USP48-214ENST00000532737 FLT3LGP49771 235 aa28.91■■■□□ 2.22
USP48-214ENST00000532737 APOA5Q6Q788 366 aa28.91■■■□□ 2.22
USP48-214ENST00000532737 VAT1LQ9HCJ6 419 aa28.91■■■□□ 2.22
USP48-214ENST00000532737 PTCH2Q9Y6C5 1203 aa28.91■■■□□ 2.22
USP48-214ENST00000532737 KIAA0100Q14667 2235 aaKnown RBP28.91■■■□□ 2.22
USP48-214ENST00000532737 MGAMO43451 1857 aa28.91■■■□□ 2.22
USP48-214ENST00000532737 KLF18A0A0U1RQI7 1052 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 CALM1P0DP23 149 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 CALM2P0DP24 149 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 CALM3P0DP25 149 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 PTPREP23469 700 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 APOBRQ0VD83 1088 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 SYNE3Q6ZMZ3 975 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 NBPF11Q86T75 865 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 CCDC144CPQ8IYA2 1237 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 CTCFLQ8NI51 663 aaPredicted RBP28.9■■■□□ 2.22
USP48-214ENST00000532737 JMJD4Q9H9V9 463 aa28.9■■■□□ 2.22
USP48-214ENST00000532737 TAL1P17542 331 aaPredicted RBP28.89■■■□□ 2.22
USP48-214ENST00000532737 COPB2P35606 906 aa28.89■■■□□ 2.22
USP48-214ENST00000532737 MORN1Q5T089 497 aa28.89■■■□□ 2.22
USP48-214ENST00000532737 MICU3Q86XE3 530 aa28.89■■■□□ 2.22
USP48-214ENST00000532737 FANCBQ8NB91 859 aa28.89■■■□□ 2.22
USP48-214ENST00000532737 PDRG1Q9NUG6 133 aa28.89■■■□□ 2.22
USP48-214ENST00000532737 DOCK3Q8IZD9 2030 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 DHX16O60231 1041 aaKnown RBP28.88■■■□□ 2.21
USP48-214ENST00000532737 ICAM1P05362 532 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 KIF5BP33176 963 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 TOB2Q14106 344 aaPredicted RBP28.88■■■□□ 2.21
USP48-214ENST00000532737 PRPF38BQ5VTL8 546 aaKnown RBP28.88■■■□□ 2.21
USP48-214ENST00000532737 USP6NLQ92738 828 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 C22orf23Q9BZE7 217 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 IVNS1ABPQ9Y6Y0 642 aa28.88■■■□□ 2.21
USP48-214ENST00000532737 SLC15A5A6NIM6 579 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 ZBTB43O43298 467 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 CYTH3O43739 400 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 CDC37Q16543 378 aaPredicted RBP28.87■■■□□ 2.21
USP48-214ENST00000532737 NUDT12Q9BQG2 462 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 RIOX1Q9H6W3 641 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 CCPG1Q9ULG6 757 aa28.87■■■□□ 2.21
USP48-214ENST00000532737 STRNO43815 780 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 PLEKHA8P1O95397 391 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 GRB14Q14449 540 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 RAET1EQ8TD07 263 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 SOCS4Q8WXH5 440 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 HOMER2Q9NSB8 354 aa28.86■■■□□ 2.21
USP48-214ENST00000532737 NAP1L2Q9ULW6 460 aaPredicted RBP28.86■■■□□ 2.21
USP48-214ENST00000532737 FCER1AP12319 257 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 ALAS1P13196 640 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 MAP2K5Q13163 448 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 IRF5Q13568 498 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 QRICH1Q2TAL8 776 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 CHST13Q8NET6 341 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 MTMR8Q96EF0 704 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 BACH2Q9BYV9 841 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 RNF146Q9NTX7 359 aa28.85■■■□□ 2.21
USP48-214ENST00000532737 MKI67P46013 3256 aaKnown RBP28.84■■■□□ 2.21
USP48-214ENST00000532737 CYP2B6P20813 491 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 RBM25P49756 843 aaKnown RBP28.84■■■□□ 2.21
USP48-214ENST00000532737 GNAQP50148 359 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 EVCP57679 992 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 TKFCQ3LXA3 575 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 ABRAQ8N0Z2 381 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 CMTR1Q8N1G2 835 aaKnown RBP28.84■■■□□ 2.21
USP48-214ENST00000532737 SRBD1Q8N5C6 995 aaKnown RBP28.84■■■□□ 2.21
USP48-214ENST00000532737 TRERF1Q96PN7 1200 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 MMP19Q99542 508 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 LZTS2Q9BRK4 669 aa28.84■■■□□ 2.21
USP48-214ENST00000532737 LARP6Q9BRS8 491 aaKnown RBP28.84■■■□□ 2.21
USP48-214ENST00000532737 GOLGA8BA8MQT2 603 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 ADORA2AP29274 412 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 RCAN1P53805 252 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 RTN1Q16799 776 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 PIGSQ96S52 555 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 KIF2CQ99661 725 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 FAM217BQ9NTX9 383 aaPredicted RBP28.83■■■□□ 2.21
USP48-214ENST00000532737 PLXNB2O15031 1838 aa28.83■■■□□ 2.21
USP48-214ENST00000532737 GOLGA8AA7E2F4 631 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 SMARCA1P28370 1054 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 RGS2P41220 211 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 KCTD2Q14681 263 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 MUM1L1Q5H9M0 696 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 TMTC3Q6ZXV5 915 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 SPZ1Q9BXG8 430 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 ALDH8A1Q9H2A2 487 aaPredicted RBP28.82■■■□□ 2.2
USP48-214ENST00000532737 UPF2Q9HAU5 1272 aaKnown RBP28.82■■■□□ 2.2
USP48-214ENST00000532737 FBXO40Q9UH90 709 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 PNMA2Q9UL42 364 aa28.82■■■□□ 2.2
USP48-214ENST00000532737 ADCY3O60266 1144 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 PPP1R11O60927 126 aaPredicted RBP28.81■■■□□ 2.2
USP48-214ENST00000532737 COBLO75128 1261 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms