RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PKP1Q13835 747 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 KCTD2Q14681 263 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 SESTD1Q86VW0 696 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 AFAP1L2Q8N4X5 818 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 GSDMBQ8TAX9 411 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 UBLCP1Q8WVY7 318 aaPredicted RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 DDAH1O94760 285 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 YARSP54577 528 aaKnown RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 ZMYND15Q9H091 742 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 NFE2L3Q9Y4A8 694 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 UAP1Q16222 522 aaPredicted RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 MIS12Q9H081 205 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 NRBP2Q9NSY0 501 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 LARSQ9P2J5 1176 aaKnown RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 CSPG5O95196 566 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 NPR1P16066 1061 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 CCDC121Q6ZUS5 278 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 UTP11Q9Y3A2 253 aaKnown RBP16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 ITIH3Q06033 890 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
PCDHA9-202ENST00000532602 K7ENM7 598 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 GABPAQ06546 454 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 LGSNQ5TDP6 509 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 PSMB7Q99436 277 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 USP17L3A6NCW0 530 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 USP17L4A6NCW7 530 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 N4BP1O75113 896 aaKnown RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 USP17L1Q7RTZ2 530 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 DPP9Q86TI2 863 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 TTLL1O95922 423 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 TNNC2P02585 160 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 LIG4P49917 911 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 FAM160B1Q5W0V3 765 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 MKRN1Q9UHC7 482 aaKnown RBP16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 USP14P54578 494 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
PCDHA9-202ENST00000532602 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 DNAJC21Q5F1R6 531 aaKnown RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 NLRC4Q9NPP4 1024 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 FEZ2Q9UHY8 353 aaPredicted RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 PPARDQ03181 441 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 MTX1Q13505 466 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 EEPD1Q7L9B9 569 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 C17orf53Q8N3J3 647 aaPredicted RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 COA7Q96BR5 231 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 LSM14BQ9BX40 385 aaKnown RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 XRCC5P13010 732 aaKnown RBP16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 AOC3Q16853 763 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 ERCC6LQ2NKX8 1250 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 Q3C1V9 767 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 SSH2Q76I76 1423 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 MYOCDQ8IZQ8 938 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 IMPACTQ9P2X3 320 aa16.29■□□□□ 0.2
PCDHA9-202ENST00000532602 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 CYP21A2P08686 494 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 PIGSQ96S52 555 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 ASIC3Q9UHC3 531 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 EBAG9O00559 213 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 IFRD2Q12894 506 aaPredicted RBP16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 PFDN4Q9NQP4 134 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 LMBRD1Q9NUN5 540 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 KIF11P52732 1056 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 SH3RF3Q8TEJ3 882 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms