RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
CSRP1-215ENST00000532313 TEX13BQ9BXU2 312 aa12.99□□□□□ -0.33
CSRP1-215ENST00000532313 N4BP3O15049 544 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
CSRP1-215ENST00000532313 JAK3P52333 1124 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 CDC42EP1Q00587 391 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 MMRN2Q9H8L6 949 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 RCAN1P53805 252 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 GOLGA8HP0CJ92 632 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 RNASELQ05823 741 aaKnown RBP12.98□□□□□ -0.33
CSRP1-215ENST00000532313 CAMK4Q16566 473 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 KIAA1841Q6NSI8 718 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 CABP7Q86V35 215 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 TNNC2P02585 160 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 LIFRP42702 1097 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 SEPT2Q15019 361 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
CSRP1-215ENST00000532313 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 LIG4P49917 911 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 HMGCS2P54868 508 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 CXCL9Q07325 125 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 NOGQ13253 232 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 FAM102BQ5T8I3 360 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 DCP1AQ9NPI6 582 aaPredicted RBP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 PFASO15067 1338 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 RASSF7Q02833 373 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 METTL23Q86XA0 190 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 ALS2CR12Q96Q35 445 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 RPLP2P05387 115 aaKnown RBP12.97□□□□□ -0.33
CSRP1-215ENST00000532313 MAPK4P31152 587 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 IGBP1P78318 339 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 MIS12Q9H081 205 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
CSRP1-215ENST00000532313 ACTN1P12814 892 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 KCNJ6P48051 423 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
CSRP1-215ENST00000532313 FAM83AQ86UY5 434 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 COL4A3BPQ9Y5P4 624 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 TBC1D22BQ9NU19 505 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 MAP4K1Q92918 833 aa12.96□□□□□ -0.33
CSRP1-215ENST00000532313 RARBP10826 455 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 RNF180Q86T96 592 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 NYAP2Q9P242 653 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 PCDHA4Q9UN74 947 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.34
CSRP1-215ENST00000532313 HOOK3Q86VS8 718 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 TTC16Q8NEE8 873 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 DDX12PQ92771 950 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 RMDN3Q96TC7 470 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.34
CSRP1-215ENST00000532313 TLR7Q9NYK1 1049 aaKnown RBP12.96□□□□□ -0.34
CSRP1-215ENST00000532313 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.34
CSRP1-215ENST00000532313 M0R2C6 588 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 CXCL11O14625 94 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 ZBTB5O15062 677 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 MCM4P33991 863 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 PFKFB2O60825 505 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 DDNO94850 711 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 HOXC6P09630 235 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 CDC42EP5Q6NZY7 148 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 MRPL44Q9H9J2 332 aaKnown RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 POLR1AO95602 1720 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 TRAF5O00463 557 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
CSRP1-215ENST00000532313 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 EHBP1Q8NDI1 1231 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 PHKBQ93100 1093 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
CSRP1-215ENST00000532313 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms