RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 DCAF4Q8WV16 495 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 HERC5Q9UII4 1024 aaKnown RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 PNMA6FA0A0J9YX94 578 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CAVIN2O95810 425 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 TBC1D10CQ8IV04 446 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CCDC117Q8IWD4 279 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 NOC4LQ9BVI4 516 aaKnown RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 NEDD4P46934 1319 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 K7ENM7 598 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 POLRMTO00411 1230 aaKnown RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 AKR1B1P15121 316 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 TYRO3Q06418 890 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 LUZP1Q86V48 1076 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 MSANTD4Q8NCY6 345 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 ATP6V0A1Q93050 837 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 RNF34Q969K3 372 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 GSTTP1A0A1W2PQM5 241 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 F5H6K3 240 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 KLRC3Q07444 240 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 TAF3Q5VWG9 929 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 TTC14Q96N46 770 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 MMP19Q99542 508 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 FERMT1Q9BQL6 677 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 RNF146Q9NTX7 359 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 ANKFY1Q9P2R3 1169 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 ZNF215Q9UL58 517 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 PLEKHA8P1O95397 391 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CYP2J2P51589 502 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CSGALNACT2Q8N6G5 542 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CDHR1Q96JP9 859 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 OSBPL5Q9H0X9 879 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 FBXO40Q9UH90 709 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 PTGDRQ13258 359 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 CCDC84Q86UT8 332 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-230ENST00000532245 DGKHQ86XP1 1220 aa8.87□□□□□ -0.99
CTNND1-230ENST00000532245 ZNF202O95125 648 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 FCER1AP12319 257 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 CASQ1P31415 396 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 LMAN1P49257 510 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 FAM193AP78312 1265 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 BMS1Q14692 1282 aaKnown RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 MFSD14CQ5VZR4 134 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 SLC7A3Q8WY07 619 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 RMDN3Q96TC7 470 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 PSMD1Q99460 953 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 KIAA1024Q9UPX6 916 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 KDM6AO15550 1401 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 GOLGA6L10A6NI86 522 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 VEGFAP15692 232 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 KRT9P35527 623 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 GSDMDP57764 484 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 CCL15Q16663 113 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 AGBL3Q8NEM8 1001 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 STAG1Q8WVM7 1258 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 TMEM106CQ9BVX2 250 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 PXDNQ92626 1479 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 BCL9O00512 1426 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 INO80B-WBP1J3KQ70 363 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 STX10O60499 249 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 ACTN2P35609 894 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 AXDND1Q5T1B0 1012 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 RCSD1Q6JBY9 416 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 NLRP7Q8WX94 980 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 INO80BQ9C086 356 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 ADARB2Q9NS39 739 aaKnown RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 KCNG1Q9UIX4 513 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 CD2APQ9Y5K6 639 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 KIAA1210Q9ULL0 1709 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 CD19P15391 556 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 MTERF2Q49AM1 385 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 TAX1BP1Q86VP1 789 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 FAM49AQ9H0Q0 323 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-230ENST00000532245 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 RABGAP1Q9Y3P9 1069 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 PCDHB13Q9Y5F0 798 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 MROH1Q8NDA8 1641 aa8.86□□□□□ -0.99
CTNND1-230ENST00000532245 STAT3P40763 770 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms