RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 CLIP2Q9UDT6 1046 aa11.42□□□□□ -0.58
LINC02548-201ENST00000531749 CHD9Q3L8U1 2897 aa11.42□□□□□ -0.58
LINC02548-201ENST00000531749 SOWAHBA6NEL2 793 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 PRDM1O75626 825 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
LINC02548-201ENST00000531749 NKX3-2P78367 333 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 ARMCX2Q7L311 632 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
LINC02548-201ENST00000531749 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
LINC02548-201ENST00000531749 ZNF536O15090 1300 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 MINDY4BA8MYZ0 360 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 COPB2P35606 906 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 GNASQ5JWF2 1037 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 MIER1Q8N108 512 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 SYMPKQ92797 1274 aaKnown RBP11.4□□□□□ -0.58
LINC02548-201ENST00000531749 KIFC2Q96AC6 838 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC02548-201ENST00000531749 ABHD16BQ9H3Z7 469 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 GNEQ9Y223 722 aaKnown RBP11.4□□□□□ -0.58
LINC02548-201ENST00000531749 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.58
LINC02548-201ENST00000531749 LCTP09848 1927 aa11.4□□□□□ -0.58
LINC02548-201ENST00000531749 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 ZBED4O75132 1171 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 PPIGQ13427 754 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC02548-201ENST00000531749 CCDC85BQ15834 202 aaPredicted RBP11.39□□□□□ -0.59
LINC02548-201ENST00000531749 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 CHMP4CQ96CF2 233 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
LINC02548-201ENST00000531749 SEC62Q99442 399 aaKnown RBP11.39□□□□□ -0.59
LINC02548-201ENST00000531749 NKX2-4Q9H2Z4 354 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 MTMR4Q9NYA4 1195 aa11.39□□□□□ -0.59
LINC02548-201ENST00000531749 ARPP21Q9UBL0 812 aaPredicted RBP11.39□□□□□ -0.59
LINC02548-201ENST00000531749 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
LINC02548-201ENST00000531749 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
LINC02548-201ENST00000531749 M0R2C6 588 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 MYOGP15173 224 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 COL9A1P20849 921 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 SNAP25P60880 206 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 TAPT1Q6NXT6 567 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 CXCL17Q6UXB2 119 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 RASGRP2Q7LDG7 609 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
LINC02548-201ENST00000531749 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 PCSK9Q8NBP7 692 aaKnown RBP11.38□□□□□ -0.59
LINC02548-201ENST00000531749 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 MKNK2Q9HBH9 465 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 IL23AQ9NPF7 189 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 SCN5AQ14524 2016 aa11.38□□□□□ -0.59
LINC02548-201ENST00000531749 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 HMMRO75330 724 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 SMPD1P17405 629 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 RABGGTBP53611 331 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 CCL23P55773 120 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 AKNAD1Q5T1N1 836 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 SLFN13Q68D06 897 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 AMOTL1Q8IY63 956 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 IFNL3Q8IZI9 196 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 TMEM199Q8N511 208 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 KBTBD3Q8NAB2 608 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 TET1Q8NFU7 2136 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 ASB2Q96Q27 587 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 NOC4LQ9BVI4 516 aaKnown RBP11.37□□□□□ -0.59
LINC02548-201ENST00000531749 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
LINC02548-201ENST00000531749 HOMER2Q9NSB8 354 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 CHD7Q9P2D1 2997 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 DDX19BQ9UMR2 479 aa11.37□□□□□ -0.59
LINC02548-201ENST00000531749 FOXP2O15409 715 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
LINC02548-201ENST00000531749 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
LINC02548-201ENST00000531749 GPAA1O43292 621 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 FGBP02675 491 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 BMP3P12645 472 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 OAZ1P54368 228 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 PSMC6P62333 389 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 ITGA7Q13683 1181 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 ZSCAN25Q6NSZ9 544 aa11.36□□□□□ -0.59
LINC02548-201ENST00000531749 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms