RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TCERG1LQ5VWI1 586 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 H3BQF6 201 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 BUB1O43683 1085 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 FGFR1OPO95684 399 aaKnown RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 MAGEA1P43355 309 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 ERVK-24P63145 666 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 TRAF5O00463 557 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 TRIM66O15016 1216 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 HSF2BPO75031 334 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 MAATS1Q7Z4T9 603 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 RRP15Q9Y3B9 282 aaKnown RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
NXF1-211ENST00000531709 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
NXF1-211ENST00000531709 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 GNA11P29992 359 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 SLC7A5Q01650 507 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 RSRC2Q7L4I2 434 aaKnown RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 NHEJ1Q9H9Q4 299 aaPredicted RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 SEPT11Q9NVA2 429 aaKnown RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 MYO1CO00159 1063 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 WNT7AO00755 349 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
NXF1-211ENST00000531709 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 AGPAT5Q9NUQ2 364 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 ZNF185O15231 689 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 KRT79Q5XKE5 535 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 PCDHA4Q9UN74 947 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 EBAG9O00559 213 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 PLCG1P19174 1290 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 UBE4AQ14139 1066 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 RNF187Q5TA31 235 aaPredicted RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 CNNM4Q6P4Q7 775 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
NXF1-211ENST00000531709 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
NXF1-211ENST00000531709 XDHP47989 1333 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 SEMA3EO15041 775 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 FANCGO15287 622 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 TROAPQ12815 778 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 LRRC41Q15345 812 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 PKN1Q16512 942 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 NELFCDQ8IXH7 590 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 TACC3Q9Y6A5 838 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 FAM237AA0A1B0GTK4 181 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 C6orf229H3BNL8 230 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 LDHCP07864 332 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 FGFR2P21802 821 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 EEF1GP26641 437 aaKnown RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 RAPGEF1Q13905 1077 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 BEND6Q5SZJ8 279 aaPredicted RBP12.63□□□□□ -0.39
NXF1-211ENST00000531709 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
NXF1-211ENST00000531709 KLK7P49862 253 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 VAV2P52735 878 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 NT5DC1Q5TFE4 455 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 P2RX5Q93086 422 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 SPAG5Q96R06 1193 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 MOCS3O95396 460 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 OR52Z1P0C646 297 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
NXF1-211ENST00000531709 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 LIMA1Q9UHB6 759 aaKnown RBP12.62□□□□□ -0.39
NXF1-211ENST00000531709 ATP1A2P50993 1020 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 EVX2Q03828 476 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms