RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 EXOC1Q9NV70 894 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 DKK3Q9UBP4 350 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 CLIP2Q9UDT6 1046 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 NUDCQ9Y266 331 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 SNCAIPQ9Y6H5 919 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 DHX57Q6P158 1386 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 ATP8B1O43520 1251 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SASH1O94885 1247 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 WISP1O95388 367 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF24P17028 368 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 HOXD10P28358 340 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 NOS3P29474 1203 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 HOXA10P31260 410 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 GSK3AP49840 483 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 CDR1P51861 262 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 MNAT1P51948 309 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 RBM6P78332 1123 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SOX4Q06945 474 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 IQCB1Q15051 598 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 E2F5Q15329 346 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 MAP3K11Q16584 847 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SLC4A8Q2Y0W8 1093 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 PARP10Q53GL7 1025 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 CCDC92Q53HC0 331 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 NAIF1Q69YI7 327 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 CCDC70Q6NSX1 233 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SEPT14Q6ZU15 432 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SPATS2Q86XZ4 545 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 ERC1Q8IUD2 1116 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 ANKRD18AQ8IVF6 992 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 DZIP1LQ8IYY4 767 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF654Q8IZM8 581 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 KIF18AQ8NI77 898 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SREK1Q8WXA9 508 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 PMM1Q92871 262 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SMARCC1Q92922 1105 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 JAKMIP2Q96AA8 810 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 UIMC1Q96RL1 719 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 WDR18Q9BV38 432 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 INO80BQ9C086 356 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 ATXN3LQ9H3M9 355 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SPTLC3Q9NUV7 552 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SPATA7Q9P0W8 599 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 RABL2BQ9UNT1 228 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 TMEM98Q9Y2Y6 226 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 RRP15Q9Y3B9 282 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 IKBKGQ9Y6K9 419 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 SCINQ9Y6U3 715 aa5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 KTN1Q86UP2 1357 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-221ENST00000531582 PABPN1LA6NDY0 278 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 TMEM110-MUSTN1A8MSY1 372 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 GOLGA6L19H0YKK7 550 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KIF2AO00139 706 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 U2SURPO15042 1029 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 GAS2O43903 313 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 OPA1O60313 960 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 MTRF1O75570 445 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 RPS6KA5O75582 802 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 NEBLO76041 1014 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 TIAF1O95411 115 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ELF1P32519 619 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 EIF4A3P38919 411 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 CHRNA4P43681 627 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 MRPL12P52815 198 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF445P59923 1031 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ERVK-24P63145 666 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ID3Q02535 119 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 G3BP1Q13283 466 aaKnown RBP eCLIP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 CAMK2GQ13555 558 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 PKN1Q16512 942 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KIAA0753Q2KHM9 967 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 PLA2G4EQ3MJ16 856 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KBTBD12Q3ZCT8 623 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KCNV1Q6PIU1 500 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 SYT10Q6XYQ8 523 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 HDXQ7Z353 690 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ARHGEF25Q86VW2 580 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 CCAR1Q8IX12 1150 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 DRC7Q8IY82 874 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 MYO1HQ8N1T3 1032 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF397Q8NF99 534 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ERMNQ8TAM6 284 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 STK35Q8TDR2 534 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 GPBAR1Q8TDU6 330 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 DHTKD1Q96HY7 919 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 MPP4Q96JB8 637 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 RHOVQ96L33 236 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 FAM81BQ96LP2 452 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 IWS1Q96ST2 819 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ZC3H12CQ9C0D7 883 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 TGIF2Q9GZN2 237 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 TMX1Q9H3N1 280 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 NRDE2Q9H7Z3 1164 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KCNQ5Q9NR82 932 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF446Q9NWS9 450 aa5.5□□□□□ -1.53
ECHDC1-221ENST00000531582 TUBA8Q9NY65 449 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms