RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 RBBP6Q7Z6E9 1792 aaKnown RBP19.64■□□□□ 0.73
SF3B2-211ENST00000531041 IFNAR1P17181 557 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 ERVK-9P63128 1117 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 ERVK-24P63145 666 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 NOM1Q5C9Z4 860 aaKnown RBP19.64■□□□□ 0.73
SF3B2-211ENST00000531041 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 NECAB1Q8N987 351 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 CPA4Q9UI42 421 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 CTDP1Q9Y5B0 961 aaPredicted RBP19.64■□□□□ 0.73
SF3B2-211ENST00000531041 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
SF3B2-211ENST00000531041 PLXNB2O15031 1838 aa19.63■□□□□ 0.73
SF3B2-211ENST00000531041 CPLX1O14810 134 aa19.63■□□□□ 0.73
SF3B2-211ENST00000531041 CDC37Q16543 378 aaPredicted RBP19.63■□□□□ 0.73
SF3B2-211ENST00000531041 CPLX2Q6PUV4 134 aaKnown RBP19.63■□□□□ 0.73
SF3B2-211ENST00000531041 GPRC5AQ8NFJ5 357 aa19.63■□□□□ 0.73
SF3B2-211ENST00000531041 TMX3Q96JJ7 454 aa19.63■□□□□ 0.73
SF3B2-211ENST00000531041 ZNF536O15090 1300 aa19.63■□□□□ 0.73
SF3B2-211ENST00000531041 ZBTB5O15062 677 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 PEX10O60683 326 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 SNAP25P60880 206 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 Q3C1V9 767 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 CPXCR1Q8N123 301 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 RRP36Q96EU6 259 aaKnown RBP19.62■□□□□ 0.73
SF3B2-211ENST00000531041 PIGSQ96S52 555 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 TEX13BQ9BXU2 312 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 SPATC1LQ9H0A9 340 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 PNMA2Q9UL42 364 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 ZSWIM8A7E2V4 1837 aa19.62■□□□□ 0.73
SF3B2-211ENST00000531041 PNMA6FA0A0J9YX94 578 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 CDKL5O76039 1030 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 ICAM1P05362 532 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 STAT3P40763 770 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 ST3GAL1Q11201 340 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 QRICH1Q2TAL8 776 aa19.61■□□□□ 0.73
SF3B2-211ENST00000531041 RNF26Q9BY78 433 aaPredicted RBP19.61■□□□□ 0.73
SF3B2-211ENST00000531041 RAVER2Q9HCJ3 691 aaKnown RBP19.61■□□□□ 0.73
SF3B2-211ENST00000531041 RBM27Q9P2N5 1060 aaKnown RBP19.61■□□□□ 0.73
SF3B2-211ENST00000531041 PRPF3O43395 683 aaKnown RBP19.6■□□□□ 0.73
SF3B2-211ENST00000531041 CCNA1P78396 465 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 PLS1Q14651 629 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 SNRNP48Q6IEG0 339 aaKnown RBP19.6■□□□□ 0.73
SF3B2-211ENST00000531041 CCDC174Q6PII3 467 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 RIOX2Q8IUF8 465 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 PHKBQ93100 1093 aa19.6■□□□□ 0.73
SF3B2-211ENST00000531041 SEC63Q9UGP8 760 aaKnown RBP19.6■□□□□ 0.73
SF3B2-211ENST00000531041 V9GY48 417 aaPredicted RBP19.6■□□□□ 0.73
SF3B2-211ENST00000531041 GPR25O00155 361 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 CTDNEP1O95476 244 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 SLC25A27O95847 323 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 FBXO11Q86XK2 927 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 CCDC83Q8IWF9 413 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 SHCBP1Q8NEM2 672 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 AGBL1Q96MI9 1066 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 MOV10L1Q9BXT6 1211 aaKnown RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 CCPG1Q9ULG6 757 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 PLXNA1Q9UIW2 1896 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 K7ELQ4 463 aaPredicted RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 PPP1R11O60927 126 aaPredicted RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 FMNL1O95466 1100 aaPredicted RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 COPB2P35606 906 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 SP3Q02447 781 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 SSRP1Q08945 709 aaKnown RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 TRAF1Q13077 416 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 TRIM22Q8IYM9 498 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 NSUN7Q8NE18 718 aaKnown RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 PIBF1Q8WXW3 757 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
SF3B2-211ENST00000531041 AMNQ9BXJ7 453 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 SLC26A6Q9BXS9 759 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 RIPK3Q9Y572 518 aa19.59■□□□□ 0.73
SF3B2-211ENST00000531041 STK36Q9NRP7 1315 aa19.58■□□□□ 0.72
SF3B2-211ENST00000531041 hCG_1642624A0A1W2PR95 340 aa19.58■□□□□ 0.72
SF3B2-211ENST00000531041 AKAP17AQ02040 695 aaKnown RBP19.58■□□□□ 0.72
SF3B2-211ENST00000531041 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
SF3B2-211ENST00000531041 PORCNQ9H237 461 aa19.58■□□□□ 0.72
SF3B2-211ENST00000531041 MROH8Q9H579 483 aa19.58■□□□□ 0.72
SF3B2-211ENST00000531041 ZNF236Q9UL36 1845 aa19.57■□□□□ 0.72
SF3B2-211ENST00000531041 LACTBP83111 547 aaPredicted RBP19.57■□□□□ 0.72
SF3B2-211ENST00000531041 CUL4AQ13619 759 aa19.57■□□□□ 0.72
SF3B2-211ENST00000531041 PKN1Q16512 942 aa19.57■□□□□ 0.72
SF3B2-211ENST00000531041 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
SF3B2-211ENST00000531041 HSCBQ8IWL3 235 aa19.57■□□□□ 0.72
SF3B2-211ENST00000531041 TSKSQ9UJT2 592 aa19.57■□□□□ 0.72
SF3B2-211ENST00000531041 ABCB11O95342 1321 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 DEXIO95424 95 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 HSPA1AP0DMV8 641 aaKnown RBP19.56■□□□□ 0.72
SF3B2-211ENST00000531041 HSPA1BP0DMV9 641 aaKnown RBP19.56■□□□□ 0.72
SF3B2-211ENST00000531041 ALAS1P13196 640 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 SCG2P13521 617 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 ERCC3P19447 782 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 MAPK4P31152 587 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 USH1GQ495M9 461 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 NCAPG2Q86XI2 1143 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 CHST13Q8NET6 341 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 EFCC1Q9HA90 598 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 PCDHA1Q9Y5I3 950 aa19.56■□□□□ 0.72
SF3B2-211ENST00000531041 LCTP09848 1927 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 hCG_1984214I3L0E3 225 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms