RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 KCNA10Q16322 511 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 C9orf50Q5SZB4 431 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 C20orf194Q5TEA3 1177 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 CCDC129Q6ZRS4 1044 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 SH3RF1Q7Z6J0 888 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 STAG1Q8WVM7 1258 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 UPF3AQ9H1J1 476 aaKnown RBP21.62■■□□□ 1.05
PSMC3-208ENST00000530887 SEMA6BQ9H3T3 888 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 RAVER2Q9HCJ3 691 aaKnown RBP21.62■■□□□ 1.05
PSMC3-208ENST00000530887 RIPK3Q9Y572 518 aa21.62■■□□□ 1.05
PSMC3-208ENST00000530887 A0A0U1RQG5 324 aaPredicted RBP21.61■■□□□ 1.05
PSMC3-208ENST00000530887 CABYRO75952 493 aa21.61■■□□□ 1.05
PSMC3-208ENST00000530887 C6orf222P0C671 652 aaPredicted RBP21.61■■□□□ 1.05
PSMC3-208ENST00000530887 NKX3-2P78367 333 aa21.61■■□□□ 1.05
PSMC3-208ENST00000530887 PPARAQ07869 468 aa21.61■■□□□ 1.05
PSMC3-208ENST00000530887 PPIGQ13427 754 aaKnown RBP eCLIP21.61■■□□□ 1.059e-6■■□□□ 12.8
PSMC3-208ENST00000530887 CCSAPQ6IQ19 270 aaPredicted RBP21.61■■□□□ 1.05
PSMC3-208ENST00000530887 STK11IPQ8N1F8 1099 aa21.61■■□□□ 1.05
PSMC3-208ENST00000530887 PNMA2Q9UL42 364 aa21.61■■□□□ 1.05
PSMC3-208ENST00000530887 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.6■■□□□ 1.05
PSMC3-208ENST00000530887 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.6■■□□□ 1.05
PSMC3-208ENST00000530887 M0R2C6 588 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 ZEB2O60315 1214 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 PRDM1O75626 825 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 TIMP1P01033 207 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 TFAP4Q01664 338 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 FAAP100Q0VG06 881 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 IKQ13123 557 aaPredicted RBP21.6■■□□□ 1.05
PSMC3-208ENST00000530887 ZMYM1Q5SVZ6 1142 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 ARMCX2Q7L311 632 aa21.6■■□□□ 1.05
PSMC3-208ENST00000530887 CDX2Q99626 313 aaPredicted RBP21.6■■□□□ 1.05
PSMC3-208ENST00000530887 LOC102724159A0A0B4J2E5 919 aa21.59■■□□□ 1.05
PSMC3-208ENST00000530887 TMEM232C9JQI7 657 aa21.59■■□□□ 1.05
PSMC3-208ENST00000530887 SLC4A3P48751 1232 aa21.59■■□□□ 1.05
PSMC3-208ENST00000530887 PWP2Q15269 919 aaKnown RBP21.59■■□□□ 1.05
PSMC3-208ENST00000530887 CCDC144BQ3MJ40 725 aa21.59■■□□□ 1.05
PSMC3-208ENST00000530887 LRRC47Q8N1G4 583 aaKnown RBP21.59■■□□□ 1.05
PSMC3-208ENST00000530887 FAM161BQ96MY7 647 aa21.59■■□□□ 1.05
PSMC3-208ENST00000530887 ISY1Q9ULR0 285 aaKnown RBP21.59■■□□□ 1.05
PSMC3-208ENST00000530887 TSPY2A6NKD2 308 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 ASGR1P07306 291 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 MX1P20591 662 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 GNASQ5JWF2 1037 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 RCSD1Q6JBY9 416 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 MFSD5Q6N075 450 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 TMEM199Q8N511 208 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 PI4K2BQ8TCG2 481 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 VTI1AQ96AJ9 217 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 MTIF3Q9H2K0 278 aaKnown RBP21.58■■□□□ 1.05
PSMC3-208ENST00000530887 TBX21Q9UL17 535 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 Q9Y3F1 56 aa21.58■■□□□ 1.05
PSMC3-208ENST00000530887 ARVCFO00192 962 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 CDK7P50613 346 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 PSRC1Q6PGN9 363 aaPredicted RBP21.57■■□□□ 1.04
PSMC3-208ENST00000530887 CCDC144CPQ8IYA2 1237 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 FAM133AQ8N9E0 248 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 MAFAQ8NHW3 353 aaPredicted RBP21.57■■□□□ 1.04
PSMC3-208ENST00000530887 RNF146Q9NTX7 359 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 STX8Q9UNK0 236 aa21.57■■□□□ 1.04
PSMC3-208ENST00000530887 NT5C2P49902 561 aa21.56■■□□□ 1.04
PSMC3-208ENST00000530887 TSHZ3Q63HK5 1081 aa21.56■■□□□ 1.04
PSMC3-208ENST00000530887 ANAPC4Q9UJX5 808 aa21.56■■□□□ 1.04
PSMC3-208ENST00000530887 LAMA2P24043 3122 aaKnown RBP21.55■■□□□ 1.04
PSMC3-208ENST00000530887 FOSL2P15408 326 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 ITGB8P26012 769 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 TNFAIP2Q03169 654 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 DCAF4Q8WV16 495 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 LENG1Q96BZ8 264 aaPredicted RBP21.55■■□□□ 1.04
PSMC3-208ENST00000530887 EVI5LQ96CN4 794 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 AP5M1Q9H0R1 490 aa21.55■■□□□ 1.04
PSMC3-208ENST00000530887 A1CFQ9NQ94 594 aaKnown RBP21.55■■□□□ 1.04
PSMC3-208ENST00000530887 PCP11498 1178 aaKnown RBP21.54■■□□□ 1.04
PSMC3-208ENST00000530887 IQSEC1Q6DN90 963 aa21.54■■□□□ 1.04
PSMC3-208ENST00000530887 SYMPKQ92797 1274 aaKnown RBP21.54■■□□□ 1.04
PSMC3-208ENST00000530887 FGD4Q96M96 766 aa21.54■■□□□ 1.04
PSMC3-208ENST00000530887 TRERF1Q96PN7 1200 aa21.54■■□□□ 1.04
PSMC3-208ENST00000530887 MPHOSPH6Q99547 160 aaKnown RBP21.54■■□□□ 1.04
PSMC3-208ENST00000530887 HELLSQ9NRZ9 838 aa21.54■■□□□ 1.04
PSMC3-208ENST00000530887 HOMER2Q9NSB8 354 aa21.54■■□□□ 1.04
PSMC3-208ENST00000530887 ADD3Q9UEY8 706 aaKnown RBP21.54■■□□□ 1.04
PSMC3-208ENST00000530887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.54■■□□□ 1.04
PSMC3-208ENST00000530887 ORC4O43929 436 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 MCCP23508 829 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 ALX1Q15699 326 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 NOL8Q76FK4 1167 aaKnown RBP21.53■■□□□ 1.04
PSMC3-208ENST00000530887 KATNBL1Q9H079 304 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 TTYH1Q9H313 450 aaPredicted RBP21.53■■□□□ 1.04
PSMC3-208ENST00000530887 VTA1Q9NP79 307 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 MCM3APO60318 1980 aa21.53■■□□□ 1.04
PSMC3-208ENST00000530887 ALAS1P13196 640 aa21.52■■□□□ 1.04
PSMC3-208ENST00000530887 NOVP48745 357 aa21.52■■□□□ 1.04
PSMC3-208ENST00000530887 FAM126BQ8IXS8 530 aa21.52■■□□□ 1.04
PSMC3-208ENST00000530887 SEC62Q99442 399 aaKnown RBP21.52■■□□□ 1.04
PSMC3-208ENST00000530887 ZNF536O15090 1300 aa21.52■■□□□ 1.03
PSMC3-208ENST00000530887 MYADML2A6NDP7 307 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 ICAM1P05362 532 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 DNAJB2P25686 324 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 AAMPQ13685 434 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 TLK2Q86UE8 772 aa21.51■■□□□ 1.03
PSMC3-208ENST00000530887 COL25A1Q9BXS0 654 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms