RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 CNTN2Q02246 1040 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 SNX17Q15036 470 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 ALX1Q15699 326 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 RCSD1Q6JBY9 416 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 MAMDC4Q6UXC1 1216 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 SH3RF1Q7Z6J0 888 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 FGD4Q96M96 766 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 RNF146Q9NTX7 359 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.73■■□□□ 1.23
SYVN1-212ENST00000530451 ZNF536O15090 1300 aa22.73■■□□□ 1.23
SYVN1-212ENST00000530451 ORC4O43929 436 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 ADAMTS4O75173 837 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 IGHDP01880 384 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 HSPD1P10809 573 aaKnown RBP22.72■■□□□ 1.23
SYVN1-212ENST00000530451 ALAS1P13196 640 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 IRX5P78411 483 aaPredicted RBP22.72■■□□□ 1.23
SYVN1-212ENST00000530451 TLE2Q04725 743 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 CCDC96Q2M329 555 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 PPP4R3BQ5MIZ7 849 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 DEFB123Q8N688 67 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 ACAD9Q9H845 621 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 PDLIM7Q9NR12 457 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 SYNRGQ9UMZ2 1314 aa22.72■■□□□ 1.23
SYVN1-212ENST00000530451 A0A1W2PQ45 241 aaPredicted RBP22.71■■□□□ 1.23
SYVN1-212ENST00000530451 A0A1W2PQY0 241 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 FDX1P10109 184 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 ACVR2BQ13705 512 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.71■■□□□ 1.23
SYVN1-212ENST00000530451 ARMCX2Q7L311 632 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 ZNF467Q7Z7K2 595 aaPredicted RBP22.71■■□□□ 1.23
SYVN1-212ENST00000530451 BADQ92934 168 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 PRR12Q9ULL5 1215 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 LAMA4Q16363 1823 aa22.71■■□□□ 1.23
SYVN1-212ENST00000530451 TRIM43BA6NCK2 446 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 MYADML2A6NDP7 307 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 ADCY6O43306 1168 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 CHD1LQ86WJ1 897 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 CCDC144CPQ8IYA2 1237 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 TRIM43Q96BQ3 446 aaPredicted RBP22.7■■□□□ 1.22
SYVN1-212ENST00000530451 TRERF1Q96PN7 1200 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 A1CFQ9NQ94 594 aaKnown RBP22.7■■□□□ 1.22
SYVN1-212ENST00000530451 CCDC171Q6TFL3 1326 aa22.7■■□□□ 1.22
SYVN1-212ENST00000530451 LRRC37A2A6NM11 1700 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 POTEB2H3BUK9 544 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 PQBP1O60828 265 aaKnown RBP22.69■■□□□ 1.22
SYVN1-212ENST00000530451 FGRP09769 529 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 SLC16A2P36021 539 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 KCNA10Q16322 511 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 CCDC144BQ3MJ40 725 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 TTBK2Q6IQ55 1244 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 PLEKHM2Q8IWE5 1019 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 ABHD16BQ9H3Z7 469 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 DDX49Q9Y6V7 483 aaKnown RBP22.69■■□□□ 1.22
SYVN1-212ENST00000530451 MYH6P13533 1939 aa22.69■■□□□ 1.22
SYVN1-212ENST00000530451 FRMPD2Q68DX3 1309 aaPredicted RBP22.68■■□□□ 1.22
SYVN1-212ENST00000530451 C6orf222P0C671 652 aaPredicted RBP22.68■■□□□ 1.22
SYVN1-212ENST00000530451 ACLYP53396 1101 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 AAMPQ13685 434 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 MUM1L1Q5H9M0 696 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 C1orf53Q5VUE5 145 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 GPR153Q6NV75 609 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 FAM133AQ8N9E0 248 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 TMEM47Q9BQJ4 181 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 STARD7Q9NQZ5 370 aa22.68■■□□□ 1.22
SYVN1-212ENST00000530451 SOWAHBA6NEL2 793 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 PLA2G6O60733 806 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 DUSP11O75319 330 aaKnown RBP22.67■■□□□ 1.22
SYVN1-212ENST00000530451 SDSP20132 328 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 SHHQ15465 462 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 KLHDC9Q8NEP7 349 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 DCAF4Q8WV16 495 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 TSEN34Q9BSV6 310 aaKnown RBP22.67■■□□□ 1.22
SYVN1-212ENST00000530451 GPCPD1Q9NPB8 672 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 CCPG1Q9ULG6 757 aa22.67■■□□□ 1.22
SYVN1-212ENST00000530451 COL6A3P12111 3177 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 LAMA2P24043 3122 aaKnown RBP22.66■■□□□ 1.22
SYVN1-212ENST00000530451 CLTBP09497 229 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 TOP1P11387 765 aaKnown RBP22.66■■□□□ 1.22
SYVN1-212ENST00000530451 ITGB8P26012 769 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 NOVP48745 357 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 NUCB1Q02818 461 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 TKFCQ3LXA3 575 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 C9orf50Q5SZB4 431 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 MFSD6Q6ZSS7 791 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 TBC1D10CQ8IV04 446 aa22.66■■□□□ 1.22
SYVN1-212ENST00000530451 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.65■■□□□ 1.22
SYVN1-212ENST00000530451 AKNAD1Q5T1N1 836 aa22.65■■□□□ 1.22
SYVN1-212ENST00000530451 CWC27Q6UX04 472 aaKnown RBP22.65■■□□□ 1.22
SYVN1-212ENST00000530451 NSMFQ6X4W1 530 aa22.65■■□□□ 1.22
SYVN1-212ENST00000530451 NOL8Q76FK4 1167 aaKnown RBP22.65■■□□□ 1.22
SYVN1-212ENST00000530451 NUP133Q8WUM0 1156 aa22.65■■□□□ 1.22
SYVN1-212ENST00000530451 VTI1AQ96AJ9 217 aa22.65■■□□□ 1.22
SYVN1-212ENST00000530451 PURBQ96QR8 312 aaKnown RBP22.65■■□□□ 1.22
SYVN1-212ENST00000530451 KATNBL1Q9H079 304 aa22.65■■□□□ 1.22
SYVN1-212ENST00000530451 ZMYM6O95789 1325 aa22.64■■□□□ 1.22
SYVN1-212ENST00000530451 MOXD2PA6NHM9 499 aa22.64■■□□□ 1.21
SYVN1-212ENST00000530451 CCSAPQ6IQ19 270 aaPredicted RBP22.64■■□□□ 1.21
SYVN1-212ENST00000530451 EEPD1Q7L9B9 569 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms