RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-218ENST00000530442 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 RAVER2Q9HCJ3 691 aaKnown RBP12.78□□□□□ -0.36
CAPN1-218ENST00000530442 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 ERCC3P19447 782 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 CDC27P30260 824 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 STAT3P40763 770 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 PSMC4P43686 418 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 METAP2P50579 478 aaKnown RBP eCLIP12.77□□□□□ -0.373e-8■■■■■ 34.2
CAPN1-218ENST00000530442 NEK4P51957 841 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 FCGRTP55899 365 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 CCNA1P78396 465 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 RIOX2Q8IUF8 465 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
CAPN1-218ENST00000530442 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
CAPN1-218ENST00000530442 SHCBP1Q8NEM2 672 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 MTMR8Q96EF0 704 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 AGBL1Q96MI9 1066 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 RIOX1Q9H6W3 641 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-218ENST00000530442 RBM28Q9NW13 759 aaKnown RBP12.77□□□□□ -0.37
CAPN1-218ENST00000530442 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-218ENST00000530442 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.37
CAPN1-218ENST00000530442 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
CAPN1-218ENST00000530442 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
CAPN1-218ENST00000530442 ICAM1P05362 532 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 PDIA3P30101 505 aaKnown RBP12.76□□□□□ -0.37
CAPN1-218ENST00000530442 MAPK4P31152 587 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 KIF22Q14807 665 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 RABEP1Q15276 862 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 QRICH1Q2TAL8 776 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 NCAPG2Q86XI2 1143 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 TPCN1Q9ULQ1 816 aa12.76□□□□□ -0.37
CAPN1-218ENST00000530442 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-218ENST00000530442 LRRC37A2A6NM11 1700 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 PPP1R11O60927 126 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-218ENST00000530442 LARGE1O95461 756 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-218ENST00000530442 SLC25A27O95847 323 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 COPB2P35606 906 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 GNAQP50148 359 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 PRKCZQ05513 592 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 FUT2Q10981 343 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 WDR78Q5VTH9 848 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
CAPN1-218ENST00000530442 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-218ENST00000530442 PIGSQ96S52 555 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 HOMER2Q9NSB8 354 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 CCPG1Q9ULG6 757 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 BRCA2P51587 3418 aa12.75□□□□□ -0.37
CAPN1-218ENST00000530442 ZBTB5O15062 677 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
CAPN1-218ENST00000530442 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
CAPN1-218ENST00000530442 STK3Q13188 491 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 GRB14Q14449 540 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 USH1GQ495M9 461 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 PLEKHH3Q7Z736 793 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
CAPN1-218ENST00000530442 MROH8Q9H579 483 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
CAPN1-218ENST00000530442 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 GABRQQ9UN88 632 aa12.74□□□□□ -0.37
CAPN1-218ENST00000530442 CD2BP2O95400 341 aaKnown RBP12.73□□□□□ -0.37
CAPN1-218ENST00000530442 GNRH1P01148 92 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 ALAS1P13196 640 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 PTPREP23469 700 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 SCRN1Q12765 414 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 NTRK3Q16288 839 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 ME3Q16798 604 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 MORN1Q5T089 497 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
CAPN1-218ENST00000530442 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
CAPN1-218ENST00000530442 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 CHST13Q8NET6 341 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 SOCS4Q8WXH5 440 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 COA7Q96BR5 231 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
CAPN1-218ENST00000530442 GJD2Q9UKL4 321 aa12.73□□□□□ -0.37
CAPN1-218ENST00000530442 ABCB11O95342 1321 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms