RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 FGAP02671 866 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 NMIQ13287 307 aaPredicted RBP24.7■■□□□ 1.54
SMPD1-204ENST00000530395 TKFCQ3LXA3 575 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 B4GALNT3Q6L9W6 998 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 KCTD1Q719H9 257 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 SMC5Q8IY18 1101 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 RILPL2Q969X0 211 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 LENG1Q96BZ8 264 aaPredicted RBP24.7■■□□□ 1.54
SMPD1-204ENST00000530395 TSEN34Q9BSV6 310 aaKnown RBP24.7■■□□□ 1.54
SMPD1-204ENST00000530395 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 RNF146Q9NTX7 359 aa24.7■■□□□ 1.54
SMPD1-204ENST00000530395 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.7■■□□□ 1.54
SMPD1-204ENST00000530395 COL6A3P12111 3177 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 CCDC171Q6TFL3 1326 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 SYNRGQ9UMZ2 1314 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 A0A1W2PQ45 241 aaPredicted RBP24.69■■□□□ 1.54
SMPD1-204ENST00000530395 A0A1W2PQY0 241 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 ADAMTS4O75173 837 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 FGRP09769 529 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 ACVR2BQ13705 512 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 PDLIM7Q9NR12 457 aa24.69■■□□□ 1.54
SMPD1-204ENST00000530395 POTEB2H3BUK9 544 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 DUSP11O75319 330 aaKnown RBP24.68■■□□□ 1.54
SMPD1-204ENST00000530395 HSPD1P10809 573 aaKnown RBP24.68■■□□□ 1.54
SMPD1-204ENST00000530395 MFAP1P55081 439 aaKnown RBP24.68■■□□□ 1.54
SMPD1-204ENST00000530395 CCDC96Q2M329 555 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 RRP12Q5JTH9 1297 aaKnown RBP24.68■■□□□ 1.54
SMPD1-204ENST00000530395 ARMCX2Q7L311 632 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 DEFB123Q8N688 67 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 DCAF4Q8WV16 495 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 AGBL1Q96MI9 1066 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 PRR12Q9ULL5 1215 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 MTMR7Q9Y216 660 aa24.68■■□□□ 1.54
SMPD1-204ENST00000530395 ZNF536O15090 1300 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 NOVP48745 357 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 TLE2Q04725 743 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 CCDC174Q6PII3 467 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 ZNF589Q86UQ0 364 aaPredicted RBP24.67■■□□□ 1.54
SMPD1-204ENST00000530395 CHD1LQ86WJ1 897 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 NUP133Q8WUM0 1156 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 FGD4Q96M96 766 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 TRERF1Q96PN7 1200 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 SPC25Q9HBM1 224 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 TACC3Q9Y6A5 838 aa24.67■■□□□ 1.54
SMPD1-204ENST00000530395 MOXD2PA6NHM9 499 aa24.66■■□□□ 1.54
SMPD1-204ENST00000530395 TOP1P11387 765 aaKnown RBP24.66■■□□□ 1.54
SMPD1-204ENST00000530395 ALAS1P13196 640 aa24.66■■□□□ 1.54
SMPD1-204ENST00000530395 ACLYP53396 1101 aa24.66■■□□□ 1.54
SMPD1-204ENST00000530395 A1CFQ9NQ94 594 aaKnown RBP24.66■■□□□ 1.54
SMPD1-204ENST00000530395 STARD7Q9NQZ5 370 aa24.66■■□□□ 1.54
SMPD1-204ENST00000530395 LAMA4Q16363 1823 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 CLTBP09497 229 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 PCP11498 1178 aaKnown RBP24.65■■□□□ 1.54
SMPD1-204ENST00000530395 CCDC144BQ3MJ40 725 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 CCDC144CPQ8IYA2 1237 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 FAM133AQ8N9E0 248 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 KLHDC9Q8NEP7 349 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 TCP11L1Q9NUJ3 509 aa24.65■■□□□ 1.54
SMPD1-204ENST00000530395 PQBP1O60828 265 aaKnown RBP24.64■■□□□ 1.54
SMPD1-204ENST00000530395 HAND2P61296 217 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 CNTN2Q02246 1040 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 NUCB1Q02818 461 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 MFSD6Q6ZSS7 791 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 RASGRP2Q7LDG7 609 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 PCSK9Q8NBP7 692 aaKnown RBP24.64■■□□□ 1.54
SMPD1-204ENST00000530395 BADQ92934 168 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 CCPG1Q9ULG6 757 aa24.64■■□□□ 1.54
SMPD1-204ENST00000530395 LRRC37A2A6NM11 1700 aa24.64■■□□□ 1.53
SMPD1-204ENST00000530395 TRIM43BA6NCK2 446 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 ASB14A6NK59 587 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 C6orf222P0C671 652 aaPredicted RBP24.63■■□□□ 1.53
SMPD1-204ENST00000530395 SDSP20132 328 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 CST5P28325 142 aaPredicted RBP24.63■■□□□ 1.53
SMPD1-204ENST00000530395 SNAP25P60880 206 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 KCNA10Q16322 511 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 AKNAD1Q5T1N1 836 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 Q7L0L9 218 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 SH3RF1Q7Z6J0 888 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 PLEKHM2Q8IWE5 1019 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 TRIM43Q96BQ3 446 aaPredicted RBP24.63■■□□□ 1.53
SMPD1-204ENST00000530395 TMEM47Q9BQJ4 181 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 OSBPL3Q9H4L5 887 aa24.63■■□□□ 1.53
SMPD1-204ENST00000530395 RNF41Q9H4P4 317 aaPredicted RBP24.63■■□□□ 1.53
SMPD1-204ENST00000530395 ICAM1P05362 532 aa24.62■■□□□ 1.53
SMPD1-204ENST00000530395 GLT1D1Q96MS3 346 aa24.62■■□□□ 1.53
SMPD1-204ENST00000530395 UPF3AQ9H1J1 476 aaKnown RBP24.62■■□□□ 1.53
SMPD1-204ENST00000530395 DCDC2CA8MYV0 355 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 IGHDP01880 384 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 GJA9P57773 515 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 SYDE2Q5VT97 1194 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 CCSAPQ6IQ19 270 aaPredicted RBP24.61■■□□□ 1.53
SMPD1-204ENST00000530395 BTNL9Q6UXG8 535 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 EXOC6Q8TAG9 804 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 TOX2Q96NM4 488 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 KATNBL1Q9H079 304 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 RANBP17Q9H2T7 1088 aaKnown RBP24.61■■□□□ 1.53
SMPD1-204ENST00000530395 DIAPH3Q9NSV4 1193 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 MROH7Q68CQ1 1323 aa24.61■■□□□ 1.53
SMPD1-204ENST00000530395 MYADML2A6NDP7 307 aa24.6■■□□□ 1.53
SMPD1-204ENST00000530395 SOWAHBA6NEL2 793 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms