RNA–Protein interactions for RNA: ENST00000529843.1

BEST3-206, Transcript of bestrophin 3, human

TSL 3

Gene BEST3, Length 386 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST3-206	ENST00000529843	MTERF2	Q49AM1	385 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	SPATC1	Q76KD6	591 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF765	Q7L2R6	523 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	EEPD1	Q7L9B9	569 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	CCDC144CP	Q8IYA2	1237 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	LILRB2	Q8N423	598 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	TMEM151A	Q8N4L1	468 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	SMARCC1	Q92922	1105 aa	Predicted RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	MFSD14A	Q96MC6	490 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	HEXIM2	Q96MH2	286 aa	Known RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	ASPN	Q9BXN1	380 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	MKRN2	Q9H000	416 aa	Known RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	KLHL25	Q9H0H3	589 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	MRPL42	Q9Y6G3	142 aa	Known RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	NKTR	P30414	1462 aa	Known RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	PLEKHH2	Q8IVE3	1493 aa		4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	SCAF11	Q99590	1463 aa	Known RBP	4.99	□□□□□ -1.61
BEST3-206	ENST00000529843	LRP6	O75581	1613 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	DIAPH1	O60610	1272 aa	Known RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	F13B	P05160	661 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF143	P52747	638 aa	Predicted RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	RNF4	P78317	190 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	AUH	Q13825	339 aa	Known RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ANKRD39	Q53RE8	183 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	RNF43	Q68DV7	783 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	GIMAP7	Q8NHV1	300 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF669	Q96BR6	464 aa	Predicted RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	RNPC3	Q96LT9	517 aa	Known RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843		Q96M66	194 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	KANSL2	Q9H9L4	492 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	APEX2	Q9UBZ4	518 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	PFDN2	Q9UHV9	154 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ZMYM5	Q9UJ78	669 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	TPX2	Q9ULW0	747 aa	Known RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	TMA7	Q9Y2S6	64 aa	Known RBP	4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF451	Q9Y4E5	1061 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843		U3KQE9	123 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	CCDC18	Q5T9S5	1454 aa		4.98	□□□□□ -1.61
BEST3-206	ENST00000529843	RGS12	O14924	1447 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	MAP3K1	Q13233	1512 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	SRCAP	Q6ZRS2	3230 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	ANKRD34B	A5PLL1	514 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	PRR33	A8MZF0	331 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	H2AFB1	P0C5Y9	115 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	H2AFB2	P0C5Z0	115 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	NFIA	Q12857	509 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	IFRD2	Q12894	506 aa	Predicted RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	SNW1	Q13573	536 aa	Known RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	DOC2B	Q14184	412 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	NBPF9	Q3BBW0	867 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	NKAPL	Q5M9Q1	402 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	HEATR6	Q6AI08	1181 aa	Known RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	SDE2	Q6IQ49	451 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	C22orf34	Q6ZV56	151 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	C7orf61	Q8IZ16	206 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	FAM177A1	Q8N128	213 aa	Predicted RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	FBXL6	Q8N531	539 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	JMY	Q8N9B5	988 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	DTWD2	Q8NBA8	298 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	SH3TC2	Q8TF17	1288 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	EPN3	Q9H201	632 aa		4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	SPAG9	O60271	1321 aa	Known RBP	4.97	□□□□□ -1.61
BEST3-206	ENST00000529843	MSH6	P52701	1360 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	CD247	P20963	164 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	CYP7A1	P22680	504 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	CHMP4BP1	P59074	171 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	SFRP5	Q5T4F7	317 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	GPAT2	Q6NUI2	795 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	GGT6	Q6P531	493 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	COX4I2	Q96KJ9	171 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	FGD4	Q96M96	766 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	SPOCK3	Q9BQ16	436 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	DBNDD2	Q9BQY9	259 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	PRDM14	Q9GZV8	571 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	GP6	Q9HCN6	339 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	GTF2IRD1	Q9UHL9	959 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	CEP152	O94986	1710 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	KDM2B	Q8NHM5	1336 aa		4.96	□□□□□ -1.62
BEST3-206	ENST00000529843	ADCY3	O60266	1144 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	CBX7	O95931	251 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	FST	P19883	344 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	KIR3DL1	P43629	444 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	ZNF445	P59923	1031 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	CYP27A1	Q02318	531 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	TNK2	Q07912	1038 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	SSRP1	Q08945	709 aa	Known RBP	4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	SQSTM1	Q13501	440 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	CYP27C1	Q4G0S4	372 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	C2orf27A	Q580R0	203 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	SHKBP1	Q8TBC3	707 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	LGR4	Q9BXB1	951 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	WHRN	Q9P202	907 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	PCDHB12	Q9Y5F1	795 aa		4.95	□□□□□ -1.62
BEST3-206	ENST00000529843	CAPN6	Q9Y6Q1	641 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms