RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FOXD4L3Q6VB84 417 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CLEC10AQ8IUN9 316 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TBC1D10CQ8IV04 446 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NKX2-3Q8TAU0 364 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TRIM44Q96DX7 344 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CEP95Q96GE4 821 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 FEZ1Q99689 392 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CLIP2Q9UDT6 1046 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PHIPQ8WWQ0 1821 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 LAMB1P07942 1786 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L15C9J2P7 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L13C9JLJ4 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 F5H6K3 240 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NMT2O60551 498 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 FKTNO75072 461 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TTLL1O95922 423 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 RECKO95980 971 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 OATP04181 439 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CYP2C8P10632 490 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 SP3Q02447 781 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 KLRC3Q07444 240 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ELOAQ14241 798 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 RRP12Q5JTH9 1297 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 KIAA1755Q5JYT7 1200 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CATSPERGQ6ZRH7 1159 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ZNF296Q8WUU4 475 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 LPAR1Q92633 364 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ESR2Q92731 530 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TTC14Q96N46 770 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PARK7Q99497 189 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 P2RX7Q99572 595 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 KRT23Q9C075 422 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 SH2D4AQ9H788 454 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 VCPKMTQ9H867 229 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CNNM2Q9H8M5 875 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ANO2Q9NQ90 1003 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TOMM22Q9NS69 142 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ZSWIM5Q9P217 1185 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PNMA3Q9UL41 463 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 SYNPO2Q9UMS6 1093 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 RBM8AQ9Y5S9 174 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PLIN4Q96Q06 1357 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 ATAD5Q96QE3 1844 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 B4E1Z4 1266 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 E7EWF7 191 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 BCRP11274 1271 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 VCAM1P19320 739 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 COG2Q14746 738 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 QPCTQ16769 361 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 SPIRE2Q8WWL2 714 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 RPAP3Q9H6T3 665 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 HOXC10Q9NYD6 342 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 STX8Q9UNK0 236 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 TAF6LQ9Y6J9 622 aa7.35□□□□□ -1.23
ATPAF1-209ENST00000529214 NEDD4P46934 1319 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 ADGRA2Q96PE1 1338 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 SLC27A2O14975 620 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 WDR46O15213 610 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 EPB41L2O43491 1005 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 GPR37L1O60883 481 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 SOX11P35716 441 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 GCLCP48506 637 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 HERVK_113P62684 666 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 TRDNQ13061 729 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 TSGA10IPQ3SY00 556 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 CCDC178Q5BJE1 867 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 COL13A1Q5TAT6 717 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 CREB3L3Q68CJ9 461 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 POTEEQ6S8J3 1075 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 IQCA1Q86XH1 822 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 DGKHQ86XP1 1220 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 SPICE1Q8N0Z3 855 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 GMCL1P1Q8NEA9 526 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 NCOA7Q8NI08 942 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 SMCR8Q8TEV9 937 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 STK32AQ8WU08 396 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 ANKS1AQ92625 1134 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 CPA4Q9UI42 421 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
ATPAF1-209ENST00000529214 MARCH6O60337 910 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 LILRB3O75022 631 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 REC8O95072 547 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 NDUFB10O96000 172 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms